Hi all,
I feel I should know this one. I have a program looping through structures
and bringing each small molecule into a single multi-state object so I can
tab through the states.
I do:
create all_lig, this_ligand, 1, 1
then go on to the next one:
create all_lig, next_ligand, 1, 2
and so on....
however, the bonds get all messed up, presumably with atom names confused? I
tried issuing a "rebuild all_lig" in between adding but that didn't seem to
help. What am I missing?
Thanks,
Seth
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