Good afternoon, I'm using PyMOL 1.3 and I would like to select one specific part of the molecule based on a peptide sequence that it is presented in protein. Is there any way to select subsequences in PyMOL?
A fictitious example: Protein sequence: ...SMVADLTQATFTKEGKTQKVVDVLDHDYVFDTFFK... Peptide: GKTQKV I know that I can search manually this peptide in the sequence using the PyMOL. However, for huge protein, it takes a lot of time. Is there any automated routine to do this? Thank you in advance. Júlio César da Silva Brazilian Bioscience Laboratory Campinas, SP - Brazil + 55 (19) 3512-1116 julio.si...@lnbio.org.br<mailto:julio.si...@lnbio.org.br> (novo e-mail: favor atualizar o seu cadastro) www.lnbio.org.br<http://www.lnls.br/> -- Bradley J. Hintze Graduate Student Duke University School of Medicine 801-712-8799
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