Hello, What I would like to do is write a python script that simultaneously drives lammps (my molecular simulation program), puts lammps output to pymol, and plot some pylab plots.
When I try this: import pymol pymol.finish_launching() import matplotlib import pylab pylab.ion() pylab.figure() pylab.ioff() pylab.draw([1,2],[1,2]) raw_input() I do get my interactive pymol gui, but the pylab window is dead. It pops up, but no line is drawn. I suspect that has something to do with the gui handlers, so I would have to attach the pylab gui to the pymol one, I suspect. I just don't know how to do that. Nota bene: replacing the pylab lines with pylab.figure() pylab.plot([1,2],[1,2]) pylab.show() works, but then the handler is with the pylab window, and no code after that can be executed any more. So you cannot update this window during execution time. Thanks for any help! ------------------------------------------------------------------------------ Lotusphere 2011 Register now for Lotusphere 2011 and learn how to connect the dots, take your collaborative environment to the next level, and enter the era of Social Business. http://p.sf.net/sfu/lotusphere-d2d _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
