Hi, Jason and Thomas,
Thank you for your interest and suggestions!
The plugin has been updated s.t. it now also recognizes objects. The
support for single-word selectors ('polymer', 'all', etc) is also added.
Thanks again for the feedback!
best regards,
hongbo
On 04/12/2011 05:16 PM, Thomas Holder wrote:
> Hi Hongbo,
>
> very nice!
>
> Your plugin only accepts named selections, predefined selections like
> (all), (polymer) or object names do not work. Could you change this?
>
> Cheers,
> Thomas
>
> On Tue, Apr 12, 2011 at 4:22 PM, Hongbo Zhu
> <hongbo....@biotec.tu-dresden.de> wrote:
>> Hi, if anybody is still interested in the topic, I have made a DSSP
>> plugin for running DSSP and coloring proteins according to the DSSP
>> secondary structure assignment. Please have a look at:
>>
>> http://www.pymolwiki.org/index.php/DSSP
>>
>> This plugin invokes DSSP (presuming you already have DSSP binary on your
>> hard drive) and reads the output using BioPython. It then makes several
>> selections, each for a kind of secondary structure elements (SSE) if
>> there is at least one residue in the input selection is assigned with
>> the SSE.
>>
>> regards,
>> hongbo
>
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