Hi Jonathan, > I am trying to model the flexing about the elbow angle > of 2 Fabs, that are in close proximity > to each other on a viral capsid.
This sounds pretty cool. Any chance you could share the final movie with us? > i have created the 2 nmr like pdbs (that contain the morphs) > , that have 30 sets of coordinates in each of them. The models > go from model 1, angle x to model 30 angle y. > > i would like to animate both fabs simultaneously > but stagger the looping so that > > pdb1 the states go from 1 to 30, whilst at the same time > for pdb2 the states go from 30 to 1. This is possible from the movie timeline (right-click store with state, for a given object) or the command API using the 'mview' command: # make a blank movie over 110 frames mset 1x110 # goto frame ten and set obj1 and ob2 frame 10 mview store, object=obj1, state=1 mview store, object=obj2, state=100 # goto frame 110 and set obj1 and obj2 in their final states # pymol will interpolate everything else for you frame 110 mview store, object=obj1, state=100 mview store, object=obj2, state=1 This creates a 110 frame movie where in frame 10, object one transitions from state 1 to state 100 over 100 frames. Likewise, object 2 transitions from state 100 down to state 1 over 100 frames. See also, * -- http://www.pymolwiki.org/index.php/MovieSchool Hope this helps. Cheers, -- Jason -- Jason Vertrees, PhD PyMOL Product Manager Schrodinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ What Every C/C++ and Fortran developer Should Know! Read this article and learn how Intel has extended the reach of its next-generation tools to help Windows* and Linux* C/C++ and Fortran developers boost performance applications - including clusters. http://p.sf.net/sfu/intel-dev2devmay _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net