Hi Corey, You cannot easily cut up a map like that. You can, however, cut up isomeshes, isosurfaces, and volumes around a selection. See the isomesh and isosurface commands (http://pymolwiki.org/index.php/Isomesh). specifically the "carve" option, for more help.
Cheers, -- Jason On Tue, Mar 13, 2012 at 7:46 PM, Corey Fugate <fug...@hawaii.edu> wrote: > I have a pdb file and the corresponding electron density map. I can > copy a selection from the pdb to make an independent object. I'd like to be > able to select the electron density map for individual residues and ligands > in my pdb file so I can view them away from all the other protein junk. Can > someone give me some clues on how to do this? > > Thanks, > Corey > > > ------------------------------------------------------------------------------ > Keep Your Developer Skills Current with LearnDevNow! > The most comprehensive online learning library for Microsoft developers > is just $99.99! Visual Studio, SharePoint, SQL - plus HTML5, CSS3, MVC3, > Metro Style Apps, more. Free future releases when you subscribe now! > http://p.sf.net/sfu/learndevnow-d2d > _______________________________________________ > PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) > Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net -- Jason Vertrees, PhD PyMOL Product Manager Schrödinger, LLC (e) jason.vertr...@schrodinger.com (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ Virtualization & Cloud Management Using Capacity Planning Cloud computing makes use of virtualization - but cloud computing also focuses on allowing computing to be delivered as a service. http://www.accelacomm.com/jaw/sfnl/114/51521223/ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
