Hi Thomas, Yes, map_trim will work, actually. It modifies the current map, so Corey will have to reload the map for subsequent use.
map_trim mapName, selection Cheers, -- Jason On Wed, Mar 14, 2012 at 9:16 AM, Thomas Holder <[email protected]> wrote: > Hi Jason and Corey, > > what about "map_trim"? > > http://pymolwiki.org/index.php/Map_Trim > > Cheers, > Thomas > > > On 03/14/2012 02:08 PM, Jason Vertrees wrote: >> >> Hi Corey, >> >> You cannot easily cut up a map like that. You can, however, cut up >> isomeshes, isosurfaces, and volumes around a selection. See the >> isomesh and isosurface commands >> (http://pymolwiki.org/index.php/Isomesh). specifically the "carve" >> option, for more help. >> >> Cheers, >> >> -- Jason >> >> On Tue, Mar 13, 2012 at 7:46 PM, Corey Fugate<[email protected]> >> wrote: >>> >>> I have a pdb file and the corresponding electron density map. I >>> can copy a selection from the pdb to make an independent object. >>> I'd like to be able to select the electron density map for >>> individual residues and ligands in my pdb file so I can view them >>> away from all the other protein junk. Can someone give me some >>> clues on how to do this? >>> >>> Thanks, Corey > > > -- > Thomas Holder > MPI for Developmental Biology > Spemannstr. 35 > D-72076 Tübingen -- Jason Vertrees, PhD PyMOL Product Manager Schrödinger, LLC (e) [email protected] (o) +1 (603) 374-7120 ------------------------------------------------------------------------------ Virtualization & Cloud Management Using Capacity Planning Cloud computing makes use of virtualization - but cloud computing also focuses on allowing computing to be delivered as a service. http://www.accelacomm.com/jaw/sfnl/114/51521223/ _______________________________________________ PyMOL-users mailing list ([email protected]) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/[email protected]
