Easiest way to do this is to simple show the C-alpha atom. If you want to
hide the fact that you're doing this, show that single atom as a "line"
not a "stick".



Darrell Hurt, Ph.D.
Section Head, Computational Biology
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On 3/14/12 10:24 AM, "Pietro Roversi" <pietro.rove...@path.ox.ac.uk> wrote:

>Thank you Thomas!
>
>Is there a *local* version of Cartoon_side_chain_helper?
>So that I can keep all other strands flat and only allow one
>to "buckle" in correspondence to a single, specific Calpha?
>
>Regards
>
>Pietro
>________________________________________
>From: Thomas Holder [ad...@thomas-holder.de] On Behalf Of Thomas Holder
>[spel...@users.sourceforge.net]
>Sent: 13 March 2012 13:33
>To: Pietro Roversi
>Cc: pymol-users
>Subject: Re: [PyMOL] How do I force a cartoon strand throuch a given
>Calpha?
>
>Hi Petro,
>
>set cartoon_side_chain_helper, 1
>
>http://pymolwiki.org/index.php/Cartoon_side_chain_helper
>
>Cheers,
>   Thomas
>
>On 03/13/2012 01:45 PM, Pietro Roversi wrote:
>> Hello everyone,
>>
>> I am showing the structure in cartoon and a few residues in sticks,
>> I do not want the mainchain atoms only the sidechains, but when
>> I hide the mainchain a few residues in beta sheets
>> lose connectivity to their bet sheet cartoon -
>> how do I force a cartoon strand throuch a given Calpha?
>>
>> Thanks
>>
>> Pietro
>
>--
>Thomas Holder
>MPI for Developmental Biology
>Spemannstr. 35
>D-72076 Tübingen
>
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