Hi Jindrich, what do you mean by "internal variables"? The label command knows all atomic properties as python variables, listed here:
http://pymolwiki.org/index.php/Label#Built-in_Object_Properties User interaction in PyMOL can be done with wizards, but programming a wizard requires advanced python scripting skills. If you design your script as a "plugin" which will be called from the Plugin menu, you have the choice to use Tk dialogs to interrupt and ask for user input. See http://pymolwiki.org/index.php/Plugins_Tutorial Hope that helps. Cheers, Thomas On 05/10/2012 04:54 PM, Dr. Jindrich Hasek wrote: > I'd like to insert the automatic labelling > of picture with the PDB codes into my *.plm file , e.g. > > pseudoatom XXX, object1 > pseudoatom YYY, object2 > label XXX, "PDB code = ", ????? > label YYY, "PDB code = ", ????? > > Is anywhere some example or a description of PYMOL internal variables? > > Is it possible to stop running *.plm file and wait until the user selects his > favorite *.pdb file ??? > > Thank you for help > JH -- Thomas Holder MPI for Developmental Biology Spemannstr. 35 D-72076 Tübingen ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
