Hi Mike, you can fetch molecular files from any web address with the "load" command. Examples:
File type recognized from file extension: PyMOL> load http://molecules.gnu-darwin.org/html/00150001_00175000/153919/153919.pdb File type given with "format" argument: PyMOL> load http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5280443&disopt=3DSaveSDF, format=sdf Also, Mobile PyMOL (for the iPad) has it's own server capabilities, including support for PubChem, PDB, Dropbox, etc. Cheers, Thomas Mike Marchywka wrote, On 11/25/12 17:26: > I was trying to figure out what to eat today so naturally I started looking > for PDB libraries > with food components. I was looking for garlic related chemicals when I came > across this, > > http://molecules.gnu-darwin.org/ > > which seems to have many pdb files. My question I guess is, what does pymol > have > for an "API" to get molecule structures from various locations or do you just > have an > interface for pdb.org? > Besides deciding on what to eat today, I was curious if > pymol has more generalized means of finding structure files. > > Thanks. > > note new address > Mike Marchywka 2295 Collinworth Drive Marietta GA 30062. -- Thomas Holder PyMOL Developer Schrödinger Contractor ------------------------------------------------------------------------------ Monitor your physical, virtual and cloud infrastructure from a single web console. Get in-depth insight into apps, servers, databases, vmware, SAP, cloud infrastructure, etc. Download 30-day Free Trial. Pricing starts from $795 for 25 servers or applications! http://p.sf.net/sfu/zoho_dev2dev_nov _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
