Hello Anasuya, On Thu, 2013-04-04 15:49 EDT, Anasuya Dighe <anas...@mbu.iisc.ernet.in> wrote:
> Hello, > > I wanted to know if its possible in PyMOL to split a PDB file with > multiple chains,into its component chains and make smaller PDB files > corresponding to each chain. > > For eg: I have a pdb file, 1a55.pdb, having chains P,Q and R. How do I > make split it to separate components like 1a55_P.pdb, 1a55_Q.pdb, > 1a55_R.pdb > > Also, in case I have a large number of multiple chain PDB files, how > could I go about splitting each of them? In addition to the other (manual) answers, there is a script on the PyMOL wiki that does exactly this. See: http://www.pymolwiki.org/index.php/Split_chains Cheers, Rob -- Robert L. Campbell, Ph.D. Senior Research Associate/Adjunct Assistant Professor Dept. of Biomedical & Molecular Sciences Botterell Hall Rm 644 Queen's University, Kingston, ON K7L 3N6 Canada Tel: 613-533-6821 <robert.campb...@queensu.ca> http://pldserver1.biochem.queensu.ca/~rlc ------------------------------------------------------------------------------ Minimize network downtime and maximize team effectiveness. Reduce network management and security costs.Learn how to hire the most talented Cisco Certified professionals. Visit the Employer Resources Portal http://www.cisco.com/web/learning/employer_resources/index.html _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
