Hi there,
This is my first post to the group. I hope it would be a great experience :)
I am trying to compare the H-bonds in two NMR strcutures. So, I need
to calculate H-bonds with a cutoff 2.5 and angle 35 angestrom that are
availbale in 10 structures out of 20. I run list_hbonds.py as below:
list_hb, selection1, cutoff=2.5, angle=35
but it doesn not meet what I want. I want to look at inter and intra
H-bonds (between two complexes of the protein and in each chain, too).
How can I do that when I have splitted the ensemble to the 20 structures in
pymol?
Cheers
Mina
------------------------------------------------------------------------------
Minimize network downtime and maximize team effectiveness.
Reduce network management and security costs.Learn how to hire
the most talented Cisco Certified professionals. Visit the
Employer Resources Portal
http://www.cisco.com/web/learning/employer_resources/index.html
_______________________________________________
PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net)
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
