Hi, professor Holder,Thank you for the reply, but how can I do this on the
level of individual amino acids in stead of atom? I have two homolog stuctures
and I want to map the difference between the b factors of the corresonding
residues of these two stuctures rather than individual atoms. And I want to use
gradually deepened color from white to blue. Could you explain more in detail?
Thanks.
Yeping Sun
Institute of Microbiology, Chinese Academy of Sciences
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发件人：Thomas Holder <spel...@users.sourceforge.net>
发送时间：2013年12月10日(星期二) 04:50
收件人：孙业平 <sunyep...@aliyun.com>
抄 送：pymol-users <pymol-users@lists.sourceforge.net>
主 题：Re: [PyMOL] gradually changed colors with flexibility
Hi Yeping,
use the spectrum command:
PyMOL> spectrum b, blue_white_red
http://pymolwiki.org/index.php/Spectrum
Cheers,
Thomas
On 09 Dec 2013, at 11:30, sunyeping <sunyep...@aliyun.com> wrote:
> Dear all,
>
> I want to show amino acids in a structure according to their flexibility (B
> factor) by gradually changed colors. Can pymol do this? Thanks.
>
> Yeping Sun
>
> Institute of Microbiology, Chinese Academy of Sciences
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