Hi Monica,
that script does in the end:
cmd.spectrum('b', 'blue_red', seleboth + ' and b > -0.5')
so simply run the spectrum command again with minimum and maximum arguments.
PyMOL> spectrum b, blue_red, b > -0.5, minimum=0, maximum=3.0
Hope that helps.
Cheers,
Thomas
On 06 Feb 2014, at 03:47, Monica Mittal <[email protected]> wrote:
> Hi all
> I run the colorbyrmsd.py script for my PDBs. Since they are highly
> similar only a few regions were colord red as compared to the rest
> blue molecule. But I just wanted to ask can I get the RMSD scale for
> the colorbyrmsd script as I may want to change the scale and recolor
> the PBDs.
>
> Thanx in advance
> Monica
--
Thomas Holder
PyMOL Developer
Schrödinger, Inc.
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