Alternatively you could try the Morph server in Gerstein's lab and then load
each intermediate structure into a separate state for animation purposes.
http://morph2.molmovdb.org/
HTH
Carsten
From: Sampson, Jared [mailto:jared.samp...@nyumc.org]
Sent: Wednesday, April 09, 2014 12:34 PM
To: sunyeping
Cc: pymol-users
Subject: Re: [PyMOL] animation showing conformational change
Hi Yeping -
With incentive PyMOL version 1.6 or later, you can use `morph`. >From what I
read at http://pymolwiki.org/index.php/Morph, you'll need to put both
conformations of the protein into one object, as different states. See
http://pymolwiki.org/index.php/Load for more info on that.
Cheers,
Jared
--
Jared Sampson
Xiangpeng Kong Lab
NYU Langone Medical Center
550 First Avenue
New York, NY 10016
212-263-7898
http://kong.med.nyu.edu/
On Apr 9, 2014, at 11:58 AM, sunyeping
<sunyep...@aliyun.com<mailto:sunyep...@aliyun.com>> wrote:
Dear all,
If I have the structures representing two conformations of one protein, then
could I make a animation movie that shows how the protein transforms from one
conformation to the other conformation using pymol? Thanks.
Yeping Sun
Institute of Microbiology, Chinese Academy of Sciences
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