Hi Andreas, yes that's the same file, finding it from an environment variable could indeed be an option.
Cheers, Thomas On 16 Oct 2014, at 17:58, Andreas Förster <docandr...@gmail.com> wrote: > Hi Thomas, > > I assume components.cif is the same file that I've just downloaded for > LigPlot+. Would it be possible that PyMOL automatically finds this file, say > by reading $compcif or some such variable? > > Thanks. > Andreas > > On 16/10/2014 10:08, Thomas Holder wrote: >> Dear all, >> >> this is for those who like to use the latest Open-Source PyMOL code from >> SVN. We replaced the slow python mmCIF reader with a very fast and efficient >> C++ implementation. Other than being much faster, this implementation >> provides: >> >> - new connect_mode=4 does bonding with components.cif dictionary >> (components.cif needs to be present in current directory, no automatic >> downloading) >> >> - read missing residues from _pdbx_unobs_or_zero_occ_residues records and >> display them grayed out in the sequence viewer >> >> - "fetch 1a00, type=cif" downloads mmcif instead of pdb >> >> We welcome any kind of testing and feedback. >> >> Cheers, >> Thomas > > -- > Andreas Förster > X-ray Crystallograhpy Facility Manager > Centre for Structural Biology > Imperial College London -- Thomas Holder PyMOL Developer Schrödinger, Inc. ------------------------------------------------------------------------------ Comprehensive Server Monitoring with Site24x7. Monitor 10 servers for $9/Month. Get alerted through email, SMS, voice calls or mobile push notifications. Take corrective actions from your mobile device. http://p.sf.net/sfu/Zoho _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
