Hi all, Here is how I solved my problem of very slow pymol on UBUNTU14.04
On Fri, Nov 7, 2014 at 11:18 AM, Annalisa Arcella < annalisa.arce...@gmail.com> wrote: > I install > ed > NVIDIA > graphic as follow > > > sudo apt-get install nvidia-304 > sudo apt-get install nvidia-304-updates > > I restarted my pc and when I open PyMOL now I have and works very well > > PyMOL(TM) Molecular Graphics System, Version 1.7.0.0. > Copyright (c) Schrodinger, LLC. > All Rights Reserved. > Created by Warren L. DeLano, Ph.D. > PyMOL is user-supported open-source software. Although some versions > are freely available, PyMOL is not in the public domain. > If PyMOL is helpful in your work or study, then please volunteer > support for our ongoing efforts to create open and affordable > scientific > software by purchasing a PyMOL Maintenance and/or Support subscription. > More information can be found at "http://www.pymol.org";. > Enter "help" for a list of commands. > Enter "help <command-name>" for information on a specific command. > Hit ESC anytime to toggle between text and graphics. > > > > > > > > *Detected OpenGL version 2.0 or greater. Shaders available. Detected GLSL > version 3.30. OpenGL graphics engine: GL_VENDOR: NVIDIA Corporation > GL_RENDERER: Quadro NVS 290/PCIe/SSE2 GL_VERSION: 3.3.0 NVIDIA > 304.117 Adapting to Quadro hardware. Detected 4 CPU cores. Enabled > multithreaded rendering.* > > On Fri, Nov 7, 2014 at 11:14 AM, Folmer Fredslund <folm...@gmail.com> > wrote: > >> Hi again, >> >> How did you install it? through the "Additional drivers" program? >> >> It's not in PyMOL you need to set it, but in Ubuntu. PyMOL will use the >> system drivers. >> >> mvh >> Folmer >> >> ps: keeping the boring details off-list for now >> >> 2014-11-07 16:56 GMT+01:00 Annalisa Arcella <annalisa.arce...@gmail.com>: >> >>> Thanks a lot! >>> >>> I have just installed nvidia driver but pymol still recognize Gallium >>> when open. >>> >>> How can I set the new driver on pymol in order to use it when I open it? >>> >>> Thanks again, >>> >>> On Fri, Nov 7, 2014 at 7:31 AM, Folmer Fredslund <folm...@gmail.com> >>> wrote: >>> >>>> Dear Annalisa, >>>> >>>> Perhaps you should consider installing the nvidia driver instead of >>>> using nouveau? >>>> >>>> Venlig hilsen >>>> Folmer Fredslund >>>> Den 07/11/2014 04.07 skrev "Annalisa Arcella" < >>>> annalisa.arce...@gmail.com>: >>>> >>>>> Hi All, >>>>> I have installed PyMol by terminal >>>>> >>>>> sudo apt-get install pymol >>>>> >>>>> on my Ubuntu14.04 but it is very slow. >>>>> Please can you tell me if it can be supported by my PC? >>>>> >>>>> Memory 7.7 GiB >>>>> Processor Intel Core i5CPU 650@ 3.20GHz X 4 >>>>> Graphics Gallium 0.4 on NV86 >>>>> OS-Type 64-bit >>>>> >>>>> And here is what is written on PyMOL window when I open it >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> >>>>> *PyMOL(TM) Molecular Graphics System, Version 1.7.0.0. Copyright (c) >>>>> Schrodinger, LLC. All Rights Reserved. Created by Warren L. DeLano, Ph.D. >>>>> PyMOL is user-supported open-source software. Although some versions are >>>>> freely available, PyMOL is not in the public domain. If PyMOL is helpful >>>>> in your work or study, then please volunteer support for our ongoing >>>>> efforts to create open and affordable scientific software by purchasing a >>>>> PyMOL Maintenance and/or Support subscription. More information can be >>>>> found at "http://www.pymol.org <http://www.pymol.org>". Enter "help" for >>>>> a >>>>> list of commands. Enter "help <command-name>" for information on a >>>>> specific command. Hit ESC anytime to toggle between text and >>>>> graphics. Detected OpenGL version 2.0 or greater. Shaders >>>>> available. Detected GLSL version 1.30. OpenGL graphics engine: GL_VENDOR: >>>>> nouveau GL_RENDERER: Gallium 0.4 on NV86 GL_VERSION: 3.0 Mesa >>>>> 10.1.3 Detected 4 CPU cores. Enabled multithreaded rendering.* >>>>> >>>>> >>>>> >>>>> -- >>>>> *Annalisa* >>>>> >>>>> What gets us into trouble >>>>> is not what we don't know >>>>> >>>>> it's what we know for sure >>>>> that just ain't so >>>>> (*Mark Twain*) >>>>> >>>>> >>>>> ------------------------------------------------------------------------------ >>>>> >>>>> _______________________________________________ >>>>> PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) >>>>> Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users >>>>> Archives: >>>>> http://www.mail-archive.com/pymol-users@lists.sourceforge.net >>>>> >>>> >>> >>> >>> -- >>> *Annalisa* >>> >>> What gets us into trouble >>> is not what we don't know >>> >>> it's what we know for sure >>> that just ain't so >>> (*Mark Twain*) >>> >> >> >> >> -- >> Folmer Fredslund >> > > > > -- > *Annalisa* > > What gets us into trouble > is not what we don't know > > it's what we know for sure > that just ain't so > (*Mark Twain*) > -- *Annalisa* What gets us into trouble is not what we don't know it's what we know for sure that just ain't so (*Mark Twain*)
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