Albert,
looks like it is from 'cutemol'. You can probably achieve a similar effect in
Pymol
-enable perspective
-play around with occlusion (search in settings for occlusion)
-display protein with 'cartoon loop'
-show sidechains for selected residues
-fog seems to have a tint of grey in there, you could play with that setting
-not knowing the context of the figures it looks like they only displayed
C-alphas as white spheres maybe with adjusted radii
-There seems to be some light coming from back left, so playing around with
light positions may also be appropriate
Looks like it would require a lot of tinkering with settings, but you should be
able to get to a similar figure.
HTH
Carsten
-----Original Message-----
From: Albert [mailto:[email protected]]
Sent: Friday, February 12, 2016 2:39 AM
To: [email protected]
Subject: [PyMOL] how can we make this kind of figure?
Hello
I found a very nice figure in an article but the author didn't mention which
software he used for render. I am just wondering is it possible to render in
the same way in Pymol? I've attached this figure.
thx a lot
Albert
------------------------------------------------------------------------------
Site24x7 APM Insight: Get Deep Visibility into Application Performance
APM + Mobile APM + RUM: Monitor 3 App instances at just $35/Month
Monitor end-to-end web transactions and take corrective actions now
Troubleshoot faster and improve end-user experience. Signup Now!
http://pubads.g.doubleclick.net/gampad/clk?id=272487151&iu=/4140
_______________________________________________
PyMOL-users mailing list ([email protected])
Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users
Archives: http://www.mail-archive.com/[email protected]
