Can anyone help me on this regard.
On Thu, Sep 1, 2016 at 10:19 PM, Thomas Holder <
> Hi Srikanth,
> Is your custom Python installation properly set up with the custom Tcl/Tk
> installation? Does the following work and open a Tk window?
> shell> /app/python/intel/2.7.12/bin/python # path guessed
> python> import Tkinter
> python> Tkinter.Tk()
> If not, then I think you need to set TCL_LIBRARY and/or TK_LIBRARY
> environment variables first.
> Hope that helps.
> On 31 Aug 2016, at 00:46, Srikanth Gumma <sri4mail...@gmail.com> wrote:
> > Hi,
> > I recently installed pymol from source using python-2.7.12 in my
> cluster. I have to install python, tcl in a non standard location as this
> is a cluster.
> > After successful installation of pymol, I'm facing an issue while
> opening pymol. I'm not able to see pymol command window, and receiving the
> below error on the console.
> > PyMOL(TM) Molecular Graphics System, Version 126.96.36.199.
> > Copyright (c) Schrodinger, LLC.
> > All Rights Reserved.
> > Created by Warren L. DeLano, Ph.D.
> > PyMOL is user-supported open-source software. Although some versions
> > are freely available, PyMOL is not in the public domain.
> > If PyMOL is helpful in your work or study, then please volunteer
> > support for our ongoing efforts to create open and affordable
> > software by purchasing a PyMOL Maintenance and/or Support
> > More information can be found at "http://www.pymol.org".
> > Enter "help" for a list of commands.
> > Enter "help <command-name>" for information on a specific command.
> > Hit ESC anytime to toggle between text and graphics.
> > Detected OpenGL version prior to 2.0. Shaders and volumes unavailable.
> > OpenGL graphics engine:
> > GL_VENDOR: Intel
> > GL_RENDERER: Intel(R) HD Graphics 4600
> > GL_VERSION: 1.4 (4.0.0 - Build 188.8.131.5272)
> > Traceback (most recent call last):
> > File "/app/python/intel/pymol/lib/python/pmg_tk/__init__.py", line
> 35, in run
> > PMGApp(pymol_instance,skin).run(poll)
> > File "/app/python/intel/pymol/lib/python/pmg_tk/PMGApp.py", line 323,
> in __init__
> > self.root = Tk() # creates the root window for the application
> > File "/app/python/intel/2.7.12/lib/python2.7/lib-tk/Tkinter.py", line
> 1815, in __init__
> > self.tk = _tkinter.create(screenName, baseName, className,
> interactive, wantobjects, useTk, sync, use)
> > TclError: invalid command name "tcl_findLibrary"
> > Detected 24 CPU cores. Enabled multithreaded rendering.
> > Appreciate any help to resolve the issue.
> > -srikanth
> Thomas Holder
> PyMOL Principal Developer
> Schrödinger, Inc.
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