Hi Thomas, Thanks very much. It works well. However, can you please help me refine the print out? I want to include the object name and print only once the residue info for each residue. Currently it prints for all atoms of residues. I tried the following: iterate rep sticks, print(cmd.get_names(enabled_only=1),chain,resi,resn)
Thanks, Abhinav -----Original Message----- From: Thomas Holder [mailto:thomas.hol...@schrodinger.com] Sent: Wednesday, March 22, 2017 1:15 PM To: Kumar, Abhinav Cc: pymol-users@lists.sourceforge.net Subject: Re: [PyMOL] selection of residues Hi Abhinav, You can select by representation, e.g.: iterate rep sticks, print(chain, resi) or directly add labels on CA atoms: label byca rep sticks, resi Hope that helps. Cheers, Thomas On 22 Mar 2017, at 15:43, Kumar, Abhinav <aku...@intrexon.com> wrote: > Hi, > Is there a way of extracting residue information from a session file in which > a few residues are shown in sticks representation? > I am interested in changing representation/adding labels to only those > residues with stick representation. > > Thanks, > Abhinav > > Abhinav Kumar, PhD > Senior Scientist, Data Science & Computational Biology Intrexon, Inc. > 329 Oyster Point Blvd., South San Francisco, CA 94080 > (650) 597-4072 | aku...@intrexon.com -- Thomas Holder PyMOL Principal Developer Schrödinger, Inc. ________________________________ CONFIDENTIAL TRANSMISSION - This message, including any attachments, is confidential and may be privileged. If you are not the intended recipient, please delete it without further distribution and reply to the sender that you have received the message in error. ------------------------------------------------------------------------------ Check out the vibrant tech community on one of the world's most engaging tech sites, Slashdot.org! http://sdm.link/slashdot _______________________________________________ PyMOL-users mailing list (PyMOL-users@lists.sourceforge.net) Info Page: https://lists.sourceforge.net/lists/listinfo/pymol-users Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net
