Thanks for the idea Jared, but no, still nothing but atoms.
On Thu, Mar 29, 2018 at 3:31 PM, Jared Sampson <jared.samp...@columbia.edu>
wrote:
> Hi Gary -
>
> `cmd.fetch()` runs asynchronously by default, meaning `cmd.show()` might
> execute before the structure is actually loaded. Try amending to:
>
> cmd.fetch(mol_id, async=0)
>
> Does that make a difference?
>
> Cheers,
> Jared
>
>
> On March 29, 2018 at 2:18:29 PM, Gary Oberbrunner (
> ga...@darkstarsystems.com) wrote:
>
> I'm running pymol "headless" in a script. After initializing pymol and
> calling finish_loading(), I do this:
> cmd.fetch(mol_id)
> cmd.show('spheres','all')
> session = cmd.get_session()
>
> ... but my session object only includes one object, the cObjectMolecule.
> I'm looking for it to include the graphics objects as well if that's
> possible. Any hints?
>
>
> --
> Gary Oberbrunner -- CEO -- Dark Star Systems, Inc.
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--
Gary Oberbrunner -- CEO -- Dark Star Systems, Inc.
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