Hi Vatsal, This is how you show positive and negative contour:
fetch 1ubq, diffmap, type=fofc, async=0 isomesh diffmesh, diffmap, 3.0 color green, diffmesh set mesh_negative_color, red set mesh_negative_visible Example copied from: https://pymolwiki.org/index.php/mesh_negative_visible Cheers, Thomas > On Apr 26, 2019, at 12:37 AM, Vatsal Purohit <vatsal.purohi...@gmail.com> > wrote: > > Hello, > > I've been trying to color my Fo-Fc electron density maps in pymol with the > positive Fo-Fc maps showing as green and negative Fo-Fc maps showing as red > and having no luck with it. They either show up as red or green. > > I generate my maps by converting .mtz from phenix to .ccp4 files on ccp4. Any > suggestions about how I can try to color them individually this would be > greatly appreciated! > > Regards, > Vatsal > > -- > Vatsal Purohit > > PhD Candidate, Stauffacher Lab, Dept. of Biology, Purdue University > PULSe-Biophysics and Structural Biology training group > vpur...@purdue.edu | 346-719-9409 > > _______________________________________________ > PyMOL-users mailing list > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > Unsubscribe: > https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe -- Thomas Holder PyMOL Principal Developer Schrödinger, Inc. _______________________________________________ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
