Hi Jorge, You can use the "bond" command if the structures to be linked are in the same molecular object. You may have to use the "create" command with both objects in a selection to merge two objects into one.
bond [atom1, atom2 [,order]] You can control the bond thickness via the stick_radius setting. Best regards, Blaine Blaine Mooers, Ph.D. Associate Professor Department of Biochemistry and Molecular Biology College of Medicine University of Oklahoma Health Sciences Center S.L. Young Biomedical Research Center (BRC) Rm. 466 975 NE 10th Street, BRC 466 Oklahoma City, OK 73104-5419 ________________________________________ From: Jorge Fernández de Cossío Díaz [j.cossio.d...@gmail.com] Sent: Thursday, October 17, 2019 9:31 AM To: pymol-users@lists.sourceforge.net Subject: [EXTERNAL] [PyMOL] Drawing lines between residues Hi all. I have a list of pairs of residues. I want to draw lines between the residues in each pair. The lines can have different colors. So in the end I would like to achieve a figure like this one: [2019-10-15.png] What commands can I use to get this done in PyMOL? Thanks
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