Dear PyMOLers,in case any of you is interested, we have developed a new plugin for peptide model building. Originally for beta-peptides, but works for natural ones as well. It can handle mono- and disubstituted beta-amino acids (and alpha ones) with arbitrary proteinogenic side-chains and arbitrary Calpha/Cbeta chirality, and features a library of secondary structures, thus entire sequences of peptides can be built with the secondary structure defined at a per-residue base.
More information can be found on the PyMOL Wiki page: https://pymolwiki.org/index.php/Pmlbeta and the links therein.
I hope this may help some of you. Best regards, Andras Wacha -- András Ferenc Wacha, PhD research fellow, CREDO instrument responsible Biological Nanochemistry Research Group (310) Institute of Materials and Environmental Chemistry Research Centre for Natural Sciences (RCNS) Magyar tudósok körútja 2. H-1117 Budapest, Hungary Phone: +36-1-382-6427 Web: http://bionano.ttk.hu CREDO SAXS instrument: http://credo.ttk.hu
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