Good Question I like to know Too. And about Hydrophobic interaction , Is it possible to show the hydrophobic interactions on pymol too?
Em qui., 31 de mar. de 2022 às 06:49, Enrico Martinez < jmsstarli...@gmail.com> escreveu: > Dear Pymol users! > Another question related to the analysis of the multi-model pdb > obtained from protein-ligand docking calculations. > > I am using pymol to visualise protein-ligand interactions between each > pose predicted by docking and protein in my script: > > preset.ligand_cartoon('my_pdb*',_self=cmd) > > then I may use the following command to switch to the state in > multi_model pdb, which could be important: > cmd.set('state','5','my_pdb*') > > Is it possible to print the number of the state which has > 1) the maximal number of the hydrogen bonds? > 2) has a particular hydrogen bond of my interest? > Cheers, > Enrico > > > _______________________________________________ > PyMOL-users mailing list > Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net > Unsubscribe: > https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe > -- *Eduardo José Azevedo Corrêa* Biólogo| Professor e Pesquisador (37)9997-5771 (37)3271-4673 *www.epamig.br <http://www.epamig.br/>* *EPAMIG Pitangui* Rodovia BR - MG352 Km35 Zona Rural Caixa Postal 43 CEP 35650-000 - Pitangui - MG
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