Hello! I am trying to draw sticks given a set of coordinates and sometimes I succeed, sometimes I do not. In my silly mind, what I would like to do is to give two set of 3D coordinates and have a stick drawn between them. For example, given the set of coordinates
0.0 0.0 0.0 # coord 1 start 1.0 0.0 0.0 # coord 1 end 0.0 0.0 0.0 # coord 2 start 0.0 1.0 0.0 # coord 2 end 1.0 0.0 0.0 # coord 3 start 0.0 1.0 0.0 # coord 3 end I would like to obtain a triangle. This actually happens. However, if I replace all the 1.0 with 2.0, I only get the two short sides of the triangle and if I replace the 1.0 with 3.0 I get nothing. I deduce that there is a certain distance below which a stick is drawn (?). I do not see how to make this criterion work for my problem, given that there could be coordinates that are very close but do not need to be connected and coordinates that are very far and that do need to be connected. So my question is: how to draw sticks between points, given the "head" and the "tail" coordinates of each stick I want to draw? Thank you in advance. PS: sorry if the question is silly, I have looked around and found nothing...
_______________________________________________ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe
