On Jul 12, 2010, at 5:29 AM, lI wrote:
> Greetings,
>
> I have a computer with the following setup:
> 1)cblfs (pure 64-bit (amd64) linux), kernel2.6.34 gcc4.4.2
> 2)R-2.11.1
>
> I compiled R with BLAS and lapack using the switched ( --with-blas="-
> lpthread -latlas -lfptf77blas"
> --with-lapack="-llapack -lcblas" ).
> (( http://cran.r-project.org/doc/manuals/R-admin.html#Linear-algebra) )
>
> Prior to compiling R-2.11.1
> sh conigure --help gave options including the following
> SHLIB_LD command for linking shared libraries
> which contain object files from a C or Fortran compiler only
>
> SHLIB_LDFLAGS special flags used by SHLIB_LD
> SHLIB_CXXLDFLAGS special flags used by SHLIB_CXXLD
>
> SHLIB_FCD command for linking shared libraries which contain object files
> from the Fortran 95 compiler
> SHLIB_FCLDFLAGS special flags used by SHLIB_FCLD
>
>
> I did not know what to set for these and accepted whatever the defaults
> were. I ended up with shared-libraries which are as follows:-
>
> $R_HOME/lib/{libRblas.so,libRlapack.so } i.e. with the prefix 'lib'
> and the following shared-libraries without the 'lib' prefix.
>
Those are not shared libraries - they are shared objects loaded by R
dynamically.
Cheers,
Simon
> $R_HOME/modules/{R_X11.so,internet.so,lapack.so,vfonts.so }
> $R_HOME/library/cluster/libs/cluster.so
> $R_HOME/library/foreign/libs/foreign.so
> $R_HOME/library/grDevices/libs/grDevices.so
> $R_HOME/library/grid/libs/grid.so
> $R_HOME/library/KernSmooth/libs/KernSmooth.so
> $R_HOME/library/lattice/libs/lattice.so
> $R_HOME/library/MASS/libs/MASS.so
> $R_HOME/library/Matrix/libs/Matrix.so
> $R_HOME/library/methods/libs/methods.so
> $R_HOME/library/mgcv/libs/mgcv.so
> $R_HOME/library/nlme/libs/nlme.so
> $R_HOME/library/nnet/libs/nnet.so
> $R_HOME/library/rpart/libs/rpart.so
> $R_HOME/library/spatial/libs/spatial.so
> $R_HOME/library/splines/libs/splines.so
> $R_HOME/library/stats/libs/stats.so
> $R_HOME/library/survival/libs/survival.so
> $R_HOME/library/tools/libs/tools.so
>
>
> In linux builds the linker usually looks for libs with the 'lib' prefix.
> In
> this installation all the libraries
> ---in $R_HOME/modules
> ---in $R_HOME/library/patha/to/whatevr
>
> do not have the 'lib' prefix.
>
> QUESTION:
> A) does any on list know SHLIB_LD SHLIB_LDFLAGS SHLIB_CXXLDFLAGS
> SHLIB_FCD SHLIB_FCLDFLAGS settings for compiling R and do these result
> in so libs with the 'lib' prefix?
> B) If all of A) is negative what is there to be done to to enable
> generation libraries in $R_HOME/modules $R_HOME/library/~ with the 'lib'
> prefix?
>
>
> suggestions welcomed.
>
> luxInteg
>
> ______________________________________________
> R-devel@r-project.org mailing list
> https://stat.ethz.ch/mailman/listinfo/r-devel
>
>
______________________________________________
R-devel@r-project.org mailing list
https://stat.ethz.ch/mailman/listinfo/r-devel
