I compiled R 2.1.0 under Windows XP SP2 as a preliminary to rebuilding a
custom package for use with R 2.1.0. The compile completed successfully, and
I was able to run demo(graphics) successfully. But make check and make
check-recommended fail.
version
_
platform i386-pc-mingw32
arch i386
os mingw32
system i386, mingw32
status
major 2
minor 1.0
year 2005
month 04
day 18
language R
I downloaded the R source code and the tools on Tuesday morning, 19-Apr-2005.
I carefully followed the directions in the R-2.1.0/doc/html/R-admin.html
document and the directions at http://www.murdoch-sutherland.com/Rtools/. I
used the Unix tools from http://www.murdoch-sutherland.com/Rtools/tools.zip
and the MinGW compilers, MinGW-3.2.0-rc-3 (gcc 3.4.2) with the fixed f771.exe
compiler from http://www.stats.ox.ac.uk/pub/RWin/gcc-3.4.2-fix/f771.exe.
Make check fails with the following error:
running code in 'd-p-q-r-tests.R' ...OK
comparing 'd-p-q-r-tests.Rout' to './d-p-q-r-tests.Rout.save'
...386,387c386,387
< [7,] 7 -1.279898e-12 -1.279813e-12 -27.384307 -27.384307
< [8,] 8 -6.991040e-16 -6.220961e-16 -35.013437 -35.013437
---
[7,] 7 -1.279865e-12 -1.279813e-12 -27.384307 -27.384307
[8,] 8 -6.661338e-16 -6.220961e-16 -35.013437 -35.013437
932,940c932
< [1] "TRUE"
< [2] "TRUE"
< [3] "TRUE"
< [4] "TRUE"
< [5] "TRUE"
< [6] "TRUE"
< [7] "`is.NA' value mismatches: 1 in current, 0 in target"
< Warning message:
< NaNs produced in: pgamma(q, shape, scale, lower.tail, log.p)
---
[1] TRUE TRUE TRUE TRUE TRUE TRUE TRUE
951c943
< [1] "Mean scaled difference: 7.710642e-05"
---
[1] TRUE
make[3]: *** [d-p-q-r-tests.Rout] Error 1
make[2]: *** [test-Specific] Error 2
make[1]: *** [test-all-basics] Error 1
make: [test-Basic] Error 2 (ignored)
After building the recommended packages and then running make
check-recommended, I got the following error:
C:\RTools\src\R-2.1.0\src\gnuwin32>make check-recommended
-------- Testing package boot --------
Massaging examples into 'boot-Ex.R' ...
Running examples in 'boot-Ex.R' ...
-------- Testing package cluster --------
Massaging examples into 'cluster-Ex.R' ...
Running examples in 'cluster-Ex.R' ...
Running specific tests
Running `agnes-ex.R'
Comparing `agnes-ex.Rout' to `agnes-ex.Rout.save' ...552c552
< [9] 2.0000 9.0000 6.0000 32.1172 10.0000 8.0000 16.0000
27.9063
---
[9] 2.0000 9.0000 6.0000 32.1172 10.0000 8.0000 16.0000
27.9062
554c554
< [25] 4.0000 5.5000 5.0000 22.3438 5.0000 12.5000 23.7813
8.0000
---
[25] 4.0000 5.5000 5.0000 22.3438 5.0000 12.5000 23.7812
8.0000
559c559
< [65] 5.0000 19.1250 2.0000 6.0000 10.5000 4.0000 15.0000
41.5313
---
[65] 5.0000 19.1250 2.0000 6.0000 10.5000 4.0000 15.0000
41.5312
OK
Running `clara-NAs.R'
Comparing `clara-NAs.Rout' to `clara-NAs.Rout.save' ...36,47c36,47
< 6 NaN NaN NaN NaN NaN
< 7 40 45 12 56 65 NaN
< 8 8 21 46 52 33 NaN 34
< 9 23 18 64 41 22 NaN 63 29
< 10 19 30 42 61 44 NaN 33 13 42
< 11 165 178 270 209 190 NaN 181 157 168 148
< 12 169 182 244 213 194 NaN 185 161 172 152 30
< 13 155 168 248 199 180 NaN 171 147 158 138 12 18
< 14 208 216 252 236 208 NaN 264 206 188 210 18 8 4
< 15 214 222 258 242 214 NaN 270 212 194 216 12 14 10 6
< 16 157 170 260 201 182 NaN 173 149 160 140 8 28 10 8 2
< 17 171 184 246 215 196 NaN 187 163 174 154 30 2 18 6 12 28
---
6 NA NA NA NA NA
7 40 45 12 56 65 NA
8 8 21 46 52 33 NA 34
9 23 18 64 41 22 NA 63 29
10 19 30 42 61 44 NA 33 13 42
11 165 178 270 209 190 NA 181 157 168 148
12 169 182 244 213 194 NA 185 161 172 152 30
13 155 168 248 199 180 NA 171 147 158 138 12 18
14 208 216 252 236 208 NA 264 206 188 210 18 8 4
15 214 222 258 242 214 NA 270 212 194 216 12 14 10 6
16 157 170 260 201 182 NA 173 149 160 140 8 28 10 8 2
17 171 184 246 215 196 NA 187 163 174 154 30 2 18 6 12 28
50c50
< 2.00 27.25 147.50 114.60 188.50 270.00 16.00
---
2.00 27.25 147.50 114.50 188.50 270.00 16.00
OK
Running `clara-ex.R'
Running `clara.R'
Comparing `clara.Rout' to `clara.Rout.save' ...OK
Running `clusplot-out.R'
Comparing `clusplot-out.Rout' to `clusplot-out.Rout.save' ...26,28c26,28
< [1,] 0.0000 NaN 166.9258
< [2,] NaN 0 NaN
< [3,] 166.9258 NaN 0.0000
---
[1,] 0.0000 NA 166.9258
[2,] NA 0 NA
[3,] 166.9258 NA 0.0000
35,38c35,38
< [1,] 0.0000 NaN 146.3222 291.3211
< [2,] NaN 0 NaN NaN
< [3,] 146.3222 NaN 0.0000 NaN
< [4,] 291.3211 NaN NaN 0.0000
---
[1,] 0.0000 NA 146.3222 291.3211
[2,] NA 0 NA NA
[3,] 146.3222 NA 0.0000 NA
[4,] 291.3211 NA NA 0.0000
62,63c62,63
< [2,] 1.433071 0.000000 NaN
< [3,] 2.851715 NaN 0.000000
---
[2,] 1.433071 0.000000 NA
[3,] 2.851715 NA 0.000000
71,73c71,73
< [2,] 2.241570 0.00000 NaN NaN
< [3,] 1.634033 NaN 0.0000000 0.9461858
< [4,] 3.094589 NaN 0.9461858 0.0000000
---
[2,] 2.241570 0.00000 NA NA
[3,] 1.634033 NA 0.0000000 0.9461858
[4,] 3.094589 NA 0.9461858 0.0000000
81,83c81,83
< [2,] 1.989916 0.0000000 NaN NaN 0.94713417
< [3,] 1.552387 NaN 0.000000 1.17348334 2.22769309
< [4,] 3.115161 NaN 1.173483 0.00000000 0.04539385
---
[2,] 1.989916 0.0000000 NA NA 0.94713417
[3,] 1.552387 NA 0.000000 1.17348334 2.22769309
[4,] 3.115161 NA 1.173483 0.00000000 0.04539385
OK
Running `daisy-ex.R'
make[2]: *** [daisy-ex.Rout] Error 1
make[1]: *** [tests] Error 2
make: *** [pkgcheck-cluster] Error 2
--
Conrad Halling
[EMAIL PROTECTED]
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