On 10/15/2010 06:17 AM, Ying Ye wrote: > Hi! > > I am a new R user and have no clue of this error (see below) while using > edgeR package:
edgeR is a Bioconductor pacakge so please subscribe to the Bioconductor list and ask there. http://bioconductor.org/help/mailing-list/ include the output of the sessionInfo() command after library(edgeR) Martin > >> Y <- clade_reads >> y <- Y[,c(g1,g2)] >> grouping <- c( rep(1,length(g1)), rep(2,length(g2)) ) >> size <- apply(y, 2, sum) >> d <- DGEList(data = y, group = grouping, lib.size = size) > Error in DGEList(data = y, group = grouping, lib.size = size) : > unused argument(s) (data = y) > > > And g1 and g2 are two defined groups. Could anyone kindly interpret this? > > Many thanks! > > mikecrux > > ______________________________________________ > R-help@r-project.org mailing list > https://stat.ethz.ch/mailman/listinfo/r-help > PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html > and provide commented, minimal, self-contained, reproducible code. -- Computational Biology Fred Hutchinson Cancer Research Center 1100 Fairview Ave. N. PO Box 19024 Seattle, WA 98109 Location: M1-B861 Telephone: 206 667-2793 ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.