*Hi everyone, I am a new subscriber, so I hope I'm posting in the right way.
I need to load a hdf5 file, so I installed the hdf5 libraries ad the hdf5 R
package; in downloaded a small sample file from the hdf5 website and I
could correctly load it. But when I try to load my file:
*
require(hdf5)
rm(list=ls())
ls()
hdf5load("my_file.h5", verbosity=3)
*I get this error message:
*
Errore in hdf5load("my_file.h5", verbosity = 1) : unable to open HDF file:
my_file.h5
>
HDF5-DIAG: Error detected in HDF5 (1.8.4-patch1) thread 0:
#000: /Builds/unix/hdf5-1.8.4-patch1/src/H5F.c line 1514 in H5Fopen():
unable to open file
major: File accessability
minor: Unable to open file
#001: /Builds/unix/hdf5-1.8.4-patch1/src/H5F.c line 1218 in H5F_open():
unable to open file
major: File accessability
minor: Unable to open file
#002: /Builds/unix/hdf5-1.8.4-patch1/src/H5FD.c line 1079 in H5FD_open():
open failed
major: Virtual File Layer
minor: Unable to initialize object
#003: /Builds/unix/hdf5-1.8.4-patch1/src/H5FDsec2.c line 365 in
H5FD_sec2_open(): unable to open file
major: File accessability
minor: Unable to open file
#004: /Builds/unix/hdf5-1.8.4-patch1/src/H5FDsec2.c line 365 in
H5FD_sec2_open(): No such file or directory
major: Internal error (too specific to document in detail)
minor: System error message
*I really can't see the problem. I get the same error both with OSX and
Ubuntu; could it simply be that the file is too large? In that case, what
could I try to do?
Thanks in advance,*
*
*
*Flavio*
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