Thank you Prof. Brian Ripley. I'm writing a mail to glasso maintainer. Let me see if I could get some help from them.
Regards Srikanth. On Mon, 16 Mar 2015 at 19:21 Prof Brian Ripley <[email protected]> wrote: > On 16/03/2015 10:38, Srikanth Gumma wrote: > > Hi, > > > > I'm trying to install diveRsity package in our R installation. however it > > always fails with the error message "Unsupported Fortran 90 compiler or > > Fortran 90". Below is the full output. Appreciate any help. > > Ask the maintainer of the package concerned (glasso). Its way of > detecting the complier is flaky (and does not meet current CRAN > requirements on cross-platform portability). > > > > > R > > > > R version 3.1.2 (2014-10-31) -- "Pumpkin Helmet" > > Copyright (C) 2014 The R Foundation for Statistical Computing > > Platform: x86_64-unknown-linux-gnu (64-bit) > > > > R is free software and comes with ABSOLUTELY NO WARRANTY. > > You are welcome to redistribute it under certain conditions. > > Type 'license()' or 'licence()' for distribution details. > > > > Natural language support but running in an English locale > > > > R is a collaborative project with many contributors. > > Type 'contributors()' for more information and > > 'citation()' on how to cite R or R packages in publications. > > > > Type 'demo()' for some demos, 'help()' for on-line help, or > > 'help.start()' for an HTML browser interface to help. > > Type 'q()' to quit R. > > > >> install.packages("diversity") > > --- Please select a CRAN mirror for use in this session --- > > Warning messages: > > 1: package ‘diversity’ is not available (for R version 3.1.2) > > 2: Perhaps you meant ‘diveRsity’ ? > >> install.packages("diveRsity") > > also installing the dependencies ‘glasso’, ‘qgraph’ > > > > trying URL 'http://cran.rstudio.com/src/contrib/glasso_1.8.tar.gz' > > Content type 'application/x-gzip' length 41768 bytes (40 Kb) > > opened URL > > ================================================== > > downloaded 40 Kb > > > > trying URL 'http://cran.rstudio.com/src/contrib/qgraph_1.3.1.tar.gz' > > Content type 'application/x-gzip' length 211062 bytes (206 Kb) > > opened URL > > ================================================== > > downloaded 206 Kb > > > > trying URL 'http://cran.rstudio.com/src/contrib/diveRsity_1.9.73.tar.gz' > > Content type 'application/x-gzip' length 1330144 bytes (1.3 Mb) > > opened URL > > ================================================== > > downloaded 1.3 Mb > > > > * installing *source* package ‘glasso’ ... > > ** package ‘glasso’ successfully unpacked and MD5 sums checked > > This package requires a fortran 90 compiler. We assume > > that your fortran 90 environment is set up appropriately. > > Reference: Section on 'Using F95 code' in R-exts manual. > > R_HOME is /app1/centos6.3/gnu/apps/R-3.1.2/lib64/R > > Unsupported Fortran 90 compiler or Fortran 90 > > compilers unavailable! Stop! > > ERROR: configuration failed for package ‘glasso’ > > * removing ‘/nfs/app1/centos6.3/gnu/apps/R-3.1.2/lib64/R/library/glasso’ > > ERROR: dependency ‘glasso’ is not available for package ‘qgraph’ > > * removing ‘/nfs/app1/centos6.3/gnu/apps/R-3.1.2/lib64/R/library/qgraph’ > > ERROR: dependency ‘qgraph’ is not available for package ‘diveRsity’ > > * removing ‘/nfs/app1/centos6.3/gnu/apps/R-3.1.2/lib64/R/library/ > diveRsity’ > > > > The downloaded source packages are in > > ‘/tmp/Rtmp2IAilr/downloaded_packages’ > > Warning messages: > > 1: In install.packages("diveRsity") : > > installation of package ‘glasso’ had non-zero exit status > > 2: In install.packages("diveRsity") : > > installation of package ‘qgraph’ had non-zero exit status > > 3: In install.packages("diveRsity") : > > installation of package ‘diveRsity’ had non-zero exit status > > > > Regards > > Srikanth. > > > > [[alternative HTML version deleted]] > > > > ______________________________________________ > > [email protected] mailing list -- To UNSUBSCRIBE and more, see > > https://stat.ethz.ch/mailman/listinfo/r-help > > PLEASE do read the posting guide http://www.R-project.org/ > posting-guide.html > > and provide commented, minimal, self-contained, reproducible code. > > > > > -- > Brian D. Ripley, [email protected] > Emeritus Professor of Applied Statistics, University of Oxford > 1 South Parks Road, Oxford OX1 3TG, UK > [[alternative HTML version deleted]] ______________________________________________ [email protected] mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
