I am currently using "aheatmap" which is generating heatmaps based on
Pearson correlation. My data consists of RPKM values for genes from 2
groups. Each group has about 70 samples.
Is there anyway that I can modify "aheatmap" so that it generates heat maps
based on the actual input values (RPKM) and not Pearson correlation? I
want the heatmap to show high heat for higher RPKM and cold heat for lower
RPKM.
If not, is there a package out there that can do this?
Michael
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