I am currently using "aheatmap" which is generating heatmaps based on
Pearson correlation. My data consists of RPKM values for genes from 2
groups. Each group has about 70 samples.
Is there anyway that I can modify "aheatmap" so that it generates heat maps
based on the actual input values (RPKM) and not Pearson correlation? I
want the heatmap to show high heat for higher RPKM and cold heat for lower
RPKM.
If not, is there a package out there that can do this?
Michael
[[alternative HTML version deleted]]
______________________________________________
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
