It was David's answer, not mine. Please ask him (and R-Help). On Wed, Jul 10, 2019 at 7:01 PM Ana Marija <[email protected]> wrote: > > do I have to update maybe any of the libraries show in attach? > > On Wed, Jul 10, 2019 at 6:01 PM Ana Marija <[email protected]> > wrote: >> >> Hi Patrick, >> >> do you refer to this? >> https://github.com/kenhanscombe/ukbtools/issues/20 >> >> I did it: >> >> > devtools::install_github("kenhanscombe/ukbtools", build_vignettes = TRUE, >> > dependencies = TRUE,force=TRUE) >> >> but still the same error: >> > library(ukbtools) >> > my_ukb_data <- ukb_df("ukb31212") >> > ukb_icd_diagnosis(my_ukb_data, id = "1000017", icd.version = 10) >> Error: Column 1 must be named. >> Use .name_repair to specify repair. >> Call `rlang::last_error()` to see a backtrace >> >> On Wed, Jul 10, 2019 at 5:49 PM Patrick (Malone Quantitative) >> <[email protected]> wrote: >>> >>> On Wed, Jul 10, 2019 at 4:52 PM David Winsemius <[email protected]> >>> wrote: >>> > >>> > Did you read the bug report from three weeks ago and the suggested fix >>> > documented on the webpage you cited? >>> > >>> > — >>> > David >>> > >>> > >>> > Sent from my iPhone >>> > >>> > > On Jul 10, 2019, at 1:09 PM, Patrick (Malone Quantitative) >>> > > <[email protected]> wrote: >>> > > >>> > > First response: The ID column in your data is labeled "eid" but your >>> > > function call refers to "id". >>> > > >>> > > >>> > >> On Wed, Jul 10, 2019 at 1:38 PM Ana Marija >>> > >> <[email protected]> wrote: >>> > >> >>> > >> Hello, >>> > >> >>> > >> I am trying to use this program: >>> > >> https://github.com/kenhanscombe/ukbtools >>> > >> >>> > >>> my_ukb_data[1:3,1:3] >>> > >> eid sex_f31_0_0 year_of_birth_f34_0_0 >>> > >> 1 1000017 Female 1938 >>> > >> 2 1000025 Female 1951 >>> > >> 3 1000038 Male 1961 >>> > >> >>> > >>> ukb_icd_diagnosis(my_ukb_data, id = "1000017", icd.version = 10) >>> > >> Error: Column 1 must be named. >>> > >> Use .name_repair to specify repair. >>> > >> Call `rlang::last_error()` to see a backtrace >>> > >> >>> > >> Function is described here: >>> > >> https://kenhanscombe.github.io/ukbtools/reference/ukb_icd_diagnosis.html >>> > >> >>> > >> I run it on: >>> > >> >>> > >> $platform >>> > >> [1] "x86_64-pc-linux-gnu" >>> > >> $arch >>> > >> [1] "x86_64" >>> > >> $version.string >>> > >> [1] "R version 3.5.0 (2018-04-23)" >>> > >> >>> > >> Would anyone know why this is happening? >>> > >> >>> > >> Thanks! >>> > >> >>> > >> [[alternative HTML version deleted]] >>> > >> >>> > >> ______________________________________________ >>> > >> [email protected] mailing list -- To UNSUBSCRIBE and more, see >>> > >> https://stat.ethz.ch/mailman/listinfo/r-help >>> > >> PLEASE do read the posting guide >>> > >> http://www.R-project.org/posting-guide.html >>> > >> and provide commented, minimal, self-contained, reproducible code. >>> > > >>> > > ______________________________________________ >>> > > [email protected] mailing list -- To UNSUBSCRIBE and more, see >>> > > https://stat.ethz.ch/mailman/listinfo/r-help >>> > > PLEASE do read the posting guide >>> > > http://www.R-project.org/posting-guide.html >>> > > and provide commented, minimal, self-contained, reproducible code. >>> > >>> >>> ______________________________________________ >>> [email protected] mailing list -- To UNSUBSCRIBE and more, see >>> https://stat.ethz.ch/mailman/listinfo/r-help >>> PLEASE do read the posting guide http://www.R-project.org/posting-guide.html >>> and provide commented, minimal, self-contained, reproducible code.
______________________________________________ [email protected] mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
