no more crashing for me thanks!
John > sessionInfo() R version 3.0.2 Patched (2013-11-11 r64202) Platform: x86_64-apple-darwin10.8.0 (64-bit) locale: [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 attached base packages: [1] stats graphics grDevices utils datasets methods base On Sun, Nov 10, 2013 at 9:33 AM, Robert J Goedman <[email protected]> wrote: > Could someone with the preference problems try the latest nightly build for > R.app to see if the patch helps? > > Thanks, > Rob J. Goedman > [email protected] > > > > On Nov 8, 2013, at 6:58 AM, Robert J Goedman <[email protected]> wrote: > >> Hi, >> >> Thanks for the feedback/updates. The flashing of the color chooser has been >> there for a long time but I don't think that is causing this problem. >> >> I can trigger the problem in Xcode and it shows clearly where it crashes. >> Its attempting to darken an icon image, pixel by pixel, but the image has no >> data if (on our systems at least) the 'Set Color' is not used as the path to >> get there. >> >> From what I've seen, it happens on a range of systems - below my >> sessionInfo(). The work around is simple and I think innocuous enough that I >> think I can commit. But it not very satisfactory not to get to the bottom of >> this and to understand why only some of us encounter this problem. >> >> Rob J. Goedman >> [email protected] >> >> >> >> [R.app GUI 1.62 (6588) x86_64-apple-darwin13.0.0] >> >> [Workspace restored from /Users/rob/Projects/.RData] >> [History restored from /Users/rob/Projects/.Rapp.history] >> >> 2013-11-08 06:42:18.669 R[65942:707] No data in destData >> (darkenedImageWithColor.m) >>> sessionInfo() >> R Under development (unstable) (2013-10-30 r64123) >> Platform: x86_64-apple-darwin13.0.0/x86_64 (64-bit) >> >> locale: >> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >> >> attached base packages: >> [1] stats graphics grDevices utils datasets methods base >> >> loaded via a namespace (and not attached): >> [1] coda_0.16-1 grid_3.1.0 inline_0.3.13 lattice_0.20-25 >> Rcpp_0.10.6 rjags_3-11 rstan_2.0.1 >> [8] stats4_3.1.0 >>> >> >> >> On Nov 8, 2013, at 3:00 AM, peter dalgaard <[email protected]> wrote: >> >>> I was just about to tell you guys that have the problem to try running >>> R.app with gdb attached to the process. Then I realized that gdb has gone >>> in Mavericks to be replaced by lldb, which I don't have much of a clue >>> about how to operate.... >>> >>> However, at least the first few steps seem to be similar to using gdb: >>> >>> Get the process ID for R.app using >>> >>> Peters-iMac:~ pd$ ps aux | grep R.app >>> pd 28620 0.1 0.5 3877356 21724 ?? S 1Nov13 >>> 0:43.29 /Applications/R.app/Contents/MacOS/R >>> pd 74190 0.0 0.0 2432784 596 s005 S+ 11:45AM >>> 0:00.01 grep R.app >>> >>> Then attach to it using >>> >>> Peters-iMac:~ pd$ lldb -p 28620 >>> >>> give your password to allow the debugger to control the process, then, when >>> lldb fires up, tell it to resume the process >>> >>> (lldb) continue >>> Process 28620 resuming >>> >>> Next, you should try doing whatever it takes to reproduce the crash, figure >>> out how to get a traceback, and report back to the list. >>> >>> -pd >>> >>> On 07 Nov 2013, at 10:19 , Rainer M Krug <[email protected]> wrote: >>> >>>> I have to confirm both, the crash and the flashing of the colour wheel. >>>> >>>> >>>>> sessionInfo() >>>> R version 3.0.2 (2013-09-25) >>>> Platform: x86_64-apple-darwin10.8.0 (64-bit) >>>> >>>> locale: >>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >>>> >>>> attached base packages: >>>> [1] stats graphics grDevices utils datasets methods base >>>>> version >>>> _ >>>> platform x86_64-apple-darwin10.8.0 >>>> arch x86_64 >>>> os darwin10.8.0 >>>> system x86_64, darwin10.8.0 >>>> status >>>> major 3 >>>> minor 0.2 >>>> year 2013 >>>> month 09 >>>> day 25 >>>> svn rev 63987 >>>> language R >>>> version.string R version 3.0.2 (2013-09-25) >>>> nickname Frisbee Sailing >>>>> >>>> >>>> Cheers, >>>> >>>> Rainer >>>> >>>> >>>> >>>> On 11/07/13, 02:17 , John Magnotti wrote: >>>>> I removed my current R.app and installed the one at: >>>>> http://r.research.att.com/#GUI >>>>> R-3.0-branch-snowleopard-signed.pkg >>>>> >>>>> but I still get an immediate crash when I 1) open the preferences >>>>> window and 2) click any of the icons in the main "Show All" screen >>>>> (but not the tabs) >>>>> >>>>> I also noticed that switching away from either the Color or the Syntax >>>>> tab briefly flashes (open then close) the color wheel selection dialog >>>>> >>>>>> sessionInfo() >>>>> R version 3.0.2 Patched (2013-11-04 r64155) >>>>> Platform: x86_64-apple-darwin10.8.0 (64-bit) >>>>> >>>>> locale: >>>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >>>>> >>>>> attached base packages: >>>>> [1] stats graphics grDevices utils datasets methods base >>>>> >>>>> >>>>> Is there any other specific information that would help? >>>>> >>>>> Thanks, >>>>> >>>>> John >>>>> >>>>> On Wed, Nov 6, 2013 at 10:12 AM, Brandon Hurr <[email protected]> wrote: >>>>>> Robert, >>>>>> >>>>>> I never could reproduce what Brian, John or Ranier were seeing with my >>>>>> install (downloaded from http://r.research.att.com/ . >>>>>> >>>>>> Perhaps they could chime back in and give you more details. >>>>>> >>>>>> I'm now running Mavericks and still cannot replicate. >>>>>> R version 3.0.2 (2013-09-25) >>>>>> Platform: x86_64-apple-darwin10.8.0 (64-bit) >>>>>> >>>>>> locale: >>>>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >>>>>> >>>>>> attached base packages: >>>>>> [1] stats graphics grDevices utils datasets methods base >>>>>> >>>>>> Brandon >>>>>> >>>>>> >>>>>> On Wed, Nov 6, 2013 at 12:13 AM, Robert J Goedman >>>>>> <[email protected]>wrote: >>>>>> >>>>>>> Brandon, >>>>>>> >>>>>>> Do you still see this problem? >>>>>>> >>>>>>> Are you using Simon's build? >>>>>>> >>>>>>> Regards, >>>>>>> Rob J. Goedman >>>>>>> [email protected] >>>>>>> >>>>>>> >>>>>>> On Jan 2, 2013, at 3:28 AM, Prof Brian Ripley <[email protected]> >>>>>>> wrote: >>>>>>> >>>>>>> On 01/01/2013 17:48, Robert J Goedman wrote: >>>>>>> >>>>>>> Thanks for taking a look. I'll dig a bit further after getting back home >>>>>>> tomorrow. It only happens through 'Apple-,' and is then not limited to >>>>>>> just the Startup preferences (contrary to what I thought earlier). >>>>>>> >>>>>>> >>>>>>> There is a bug report, PR#15017, related to this that we also have not >>>>>>> been able to reproduce. >>>>>>> >>>>>>> >>>>>>> >>>>>>> Rob J. Goedman >>>>>>> [email protected] <mailto:[email protected] <[email protected]>> >>>>>>> >>>>>>> >>>>>>> >>>>>>> >>>>>>> On Jan 1, 2013, at 10:01 AM, Prof Brian Ripley <[email protected] >>>>>>> <mailto:[email protected] <[email protected]>>> wrote: >>>>>>> >>>>>>> Sorry, cannot reproduce (with Simon's build or mine, on Lion). >>>>>>> >>>>>>> Brian >>>>>>> >>>>>>> On 31/12/2012 19:37, Robert J Goedman wrote: >>>>>>> >>>>>>> Simon & Brian, >>>>>>> >>>>>>> Surely this is not high on your minds today, but I did notice an >>>>>>> issue with R.app. >>>>>>> >>>>>>> Using below versions of R-3.0 and the Lion64 version of R.app I >>>>>>> noticed that by immediately invoking the Startup preferences. e.g. by >>>>>>> Command/Apple-, R.app will segfault: >>>>>>> >>>>>>> *** caught segfault *** >>>>>>> address 0x10121d000, cause 'memory not mapped' >>>>>>> ... >>>>>>> >>>>>>> Above route seems to always create the crash. I've seen a few other >>>>>>> occurrences, always with the Startup preferences screen not being >>>>>>> mapped, but less reproducible. Same behavior in Simon's build as in >>>>>>> my own build of R.app. >>>>>>> >>>>>>> A reasonable work around is to get there through the Set Colors icon. >>>>>>> I'm on OSX8.3 preview 3 and using Xcode 4.6 dp4. And using the CRAN >>>>>>> version of R, did not yet build R myself as outlined in the Install >>>>>>> file. >>>>>>> >>>>>>> Happy New Year, regards, >>>>>>> Rob J. Goedman >>>>>>> [email protected] <mailto:[email protected] <[email protected]>> >>>>>>> >>>>>>> >>>>>>> ------------ my own build---------------------------- >>>>>>> >>>>>>> R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered >>>>>>> Consequences" >>>>>>> Copyright (C) 2012 The R Foundation for Statistical Computing >>>>>>> ISBN 3-900051-07-0 >>>>>>> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) >>>>>>> >>>>>>> R is free software and comes with ABSOLUTELY NO WARRANTY. >>>>>>> You are welcome to redistribute it under certain conditions. >>>>>>> Type 'license()' or 'licence()' for distribution details. >>>>>>> >>>>>>> Natural language support but running in an English locale >>>>>>> >>>>>>> R is a collaborative project with many contributors. >>>>>>> Type 'contributors()' for more information and >>>>>>> 'citation()' on how to cite R or R packages in publications. >>>>>>> >>>>>>> Type 'demo()' for some demos, 'help()' for on-line help, or >>>>>>> 'help.start()' for an HTML browser interface to help. >>>>>>> Type 'q()' to quit R. >>>>>>> >>>>>>> [R.app GUI 1.53 (6418) x86_64-apple-darwin9.8.0] >>>>>>> >>>>>>> [Workspace restored from /Users/rob/Projects/.RData] >>>>>>> [History restored from /Users/rob/Projects/.Rapp.history] >>>>>>> >>>>>>> sessionInfo() >>>>>>> >>>>>>> R Under development (unstable) (2012-12-30 r61489) >>>>>>> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) >>>>>>> >>>>>>> >>>>>>> locale: >>>>>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >>>>>>> >>>>>>> attached base packages: >>>>>>> [1] stats graphics grDevices utils datasets methods base >>>>>>> >>>>>>> >>>>>>> -------------R.app from >>>>>>> Simon--------------------------------------------- >>>>>>> >>>>>>> R Under development (unstable) (2012-12-30 r61489) -- "Unsuffered >>>>>>> Consequences" >>>>>>> Copyright (C) 2012 The R Foundation for Statistical Computing >>>>>>> ISBN 3-900051-07-0 >>>>>>> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) >>>>>>> >>>>>>> R is free software and comes with ABSOLUTELY NO WARRANTY. >>>>>>> You are welcome to redistribute it under certain conditions. >>>>>>> Type 'license()' or 'licence()' for distribution details. >>>>>>> >>>>>>> Natural language support but running in an English locale >>>>>>> >>>>>>> R is a collaborative project with many contributors. >>>>>>> Type 'contributors()' for more information and >>>>>>> 'citation()' on how to cite R or R packages in publications. >>>>>>> >>>>>>> Type 'demo()' for some demos, 'help()' for on-line help, or >>>>>>> 'help.start()' for an HTML browser interface to help. >>>>>>> Type 'q()' to quit R. >>>>>>> >>>>>>> [R.app GUI 1.53 (6418) x86_64-apple-darwin9.8.0] >>>>>>> >>>>>>> [Workspace restored from /Users/rob/Projects/.RData] >>>>>>> [History restored from /Users/rob/Projects/.Rapp.history] >>>>>>> >>>>>>> sessionInfo() >>>>>>> >>>>>>> R Under development (unstable) (2012-12-30 r61489) >>>>>>> Platform: x86_64-apple-darwin9.8.0/x86_64 (64-bit) >>>>>>> >>>>>>> >>>>>>> locale: >>>>>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >>>>>>> >>>>>>> attached base packages: >>>>>>> [1] stats graphics grDevices utils datasets methods base >>>>>>> >>>>>>> >>>>>>> >>>>>>> -- >>>>>>> Brian D. Ripley, [email protected] >>>>>>> <mailto:[email protected]<[email protected]> >>>>>>>> >>>>>>> Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ >>>>>>> University of Oxford, Tel: +44 1865 272861 (self) >>>>>>> 1 South Parks Road, +44 1865 272866 (PA) >>>>>>> Oxford OX1 3TG, UK Fax: +44 1865 272595 >>>>>>> >>>>>>> >>>>>>> >>>>>>> >>>>>>> -- >>>>>>> Brian D. Ripley, [email protected] >>>>>>> Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ >>>>>>> University of Oxford, Tel: +44 1865 272861 (self) >>>>>>> 1 South Parks Road, +44 1865 272866 (PA) >>>>>>> Oxford OX1 3TG, UK Fax: +44 1865 272595 >>>>>>> >>>>>>> >>>>>>> >>>>>>> >>>>>>> On Oct 2, 2013, at 6:09 AM, Brandon Hurr <[email protected]> wrote: >>>>>>> >>>>>>> I cannot reproduce on my mac mini (2011). OS X 10.8.5. >>>>>>> >>>>>>> R version 3.0.2 (2013-09-25) >>>>>>> Platform: x86_64-apple-darwin10.8.0 (64-bit) >>>>>>> >>>>>>> locale: >>>>>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >>>>>>> >>>>>>> attached base packages: >>>>>>> [1] stats graphics grDevices utils datasets methods base >>>>>>> >>>>>>> >>>>>>> On Wed, Oct 2, 2013 at 2:03 PM, John Magnotti <[email protected] >>>>>>>> wrote: >>>>>>> >>>>>>> Going to the preferences screen in R.app (Command + , or >>>>>>> R->preferences) and selecting any of the icons causes R to crash with >>>>>>> a segfault. If I click any the tabs at the top of the preferences >>>>>>> window R doesn't crash, but if I go back to the "show all" tab and >>>>>>> choose an option it causes an immediate failure. >>>>>>> >>>>>>> I'm running OS X 10.8.5, sessionInfo pasted below >>>>>>> >>>>>>> Thoughts? >>>>>>> >>>>>>> John >>>>>>> >>>>>>> >>>>>>> sessionInfo() >>>>>>> >>>>>>> R version 3.0.2 (2013-09-25) >>>>>>> Platform: x86_64-apple-darwin10.8.0 (64-bit) >>>>>>> >>>>>>> locale: >>>>>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >>>>>>> >>>>>>> attached base packages: >>>>>>> [1] stats graphics grDevices utils datasets methods base >>>>>>> >>>>>>> _______________________________________________ >>>>>>> R-SIG-Mac mailing list >>>>>>> [email protected] >>>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>>>>>> >>>>>>> >>>>>>> [[alternative HTML version deleted]] >>>>>>> >>>>>>> >>>>>>> _______________________________________________ >>>>>>> R-SIG-Mac mailing list >>>>>>> [email protected] >>>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>>>>>> >>>>>>> >>>>>>> >>>>>> >>>>>> [[alternative HTML version deleted]] >>>>>> >>>>>> _______________________________________________ >>>>>> R-SIG-Mac mailing list >>>>>> [email protected] >>>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>>> >>>> >>>> -- >>>> Rainer M. Krug >>>> >>>> email: RMKrug<at>gmail<dot>com >>>> >>>> _______________________________________________ >>>> R-SIG-Mac mailing list >>>> [email protected] >>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>> >>> -- >>> Peter Dalgaard, Professor >>> Center for Statistics, Copenhagen Business School >>> Solbjerg Plads 3, 2000 Frederiksberg, Denmark >>> Phone: (+45)38153501 >>> Email: [email protected] Priv: [email protected] >>> >>> _______________________________________________ >>> R-SIG-Mac mailing list >>> [email protected] >>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >> >> >> [[alternative HTML version deleted]] >> >> _______________________________________________ >> R-SIG-Mac mailing list >> [email protected] >> https://stat.ethz.ch/mailman/listinfo/r-sig-mac > > > [[alternative HTML version deleted]] > > _______________________________________________ > R-SIG-Mac mailing list > [email protected] > https://stat.ethz.ch/mailman/listinfo/r-sig-mac _______________________________________________ R-SIG-Mac mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-mac
