Hi !
I have recently updated my OS to Maverick and from this moment, I have been
unable to compile any packages (with or without C code in them). However, I can
install source package on my machine without any problem. In other words, the
command line
R CMD INSTALL pkg
works perfectly fine, where as the command line
R CMD INSTALL --build pkg
sends me the following insults after trying to compile any package (here for
the package spacemakeR):
* installing to library
/Library/Frameworks/R.framework/Versions/3.0/Resources/library
* installing *source* package spacemakeR ...
** R
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
tutorial.Rnw using UTF-8
** testing if installed package can be loaded
sh: /usr/bin/gnutar: No such file or directory
gzip: can't stat:
/Users/guslevesque/Documents/Recherche/Subversion/sedar/pkg/spacemakeR_0.0-5_R_x86_64-apple-darwin10.8.0.tar
(/Users/guslevesque/Documents/Recherche/Subversion/sedar/pkg/spacemakeR_0.0-5_R_x86_64-apple-darwin10.8.0.tar):
No such file or directory
Avis dans file.rename(file.path(startdir, filename), file.path(startdir, :
impossible de renommer le fichier
'/Users/guslevesque/Documents/Recherche/Subversion/sedar/pkg/spacemakeR_0.0-5_R_x86_64-apple-darwin10.8.0.tar.gz'
en
'/Users/guslevesque/Documents/Recherche/Subversion/sedar/pkg/spacemakeR_0.0-5.tgz',
à cause de 'No such file or directory'
packaged installation of spacemakeR as spacemakeR_0.0-5.tgz
* DONE (spacemakeR)
Note that I have carefully followed advices posted on this list and I have
install XQuartz, XCode 5.0.2 and XCode command line tools and made following
modifications to the ~/.R/Makevars file:
CC=clang
CXX=clang++
CFLAGS="-mtune=native -g -O2 -Wall -pedantic -Wconversion"
CXXFLAGS="-mtune=native -g -O2 -Wall -pedantic -Wconversion"
Any ideas what is causing this problem ?
Thanks in advance for all the help !
Guillaume Blanchet
P.S.: I almost forgot, I am working with R 3.0.2
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