Patrick, could it be that you have older versions of packages installed that were not built for Mavericks? Please check .libPaths() to make sure.
I cannot reproduce the issue, so please provide the output of sessionInfo() and if you have Xcode 5 installed, please run R -d lldb then let it crash and type bt on the prompt and send us the output. If you don't have Xcode5 or the above doesn't work, please select option 1 (abort) in the crash menu and check if you find a crash report. Thanks, Simon On Apr 11, 2014, at 2:58 PM, PatrickT <[email protected]> wrote: > First, sorry if this is a repeat: I just joined the list and don't know > what has been discussed recently. Thanks for listening! > > I just installed the latest version of R (3.1.0). I also reinstalled the > ggplot2 package. As soon as I execute library("ggplot2") I get the bomb > message "R Session Aborted" (in RStudio) or "caught segfault" message (in > the R Console). > > I'm on Mac OS X Mavericks. I downloaded the Mavericks version, which is > specifically designed for the new XCode (or something). > > I haven't tried on my Linux because I want to keep at least one working > version of R/RStudio. > > I tried to look at the log files here: > Help Menu -> Diagnostics -> Show Log Files > > but they are from last week, which is odd because I use R/RStudio every day. > > In the R Console: > library("ggplot2") > > *** caught segfault *** > address 0x18, cause 'memory not mapped' > > Traceback: > 1: dyn.load(file, DLLpath = DLLpath, ...) > 2: library.dynam(lib, package, package.lib) > 3: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = > vI[[j]]) > 4: asNamespace(ns) > 5: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc, > .libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package) > 6: loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]) > 7: namespaceImport(ns, loadNamespace(i, c(lib.loc, .libPaths()), > versionCheck = vI[[i]]), from = package) > 8: loadNamespace(package, c(which.lib.loc, lib.loc)) > 9: doTryCatch(return(expr), name, parentenv, handler) > 10: tryCatchOne(expr, names, parentenv, handlers[[1L]]) > 11: tryCatchList(expr, classes, parentenv, handlers) > 12: tryCatch(expr, error = function(e) { call <- conditionCall(e) if > (!is.null(call)) { if (identical(call[[1L]], > quote(doTryCatch))) call <- sys.call(-4L) dcall <- > deparse(call)[1L] prefix <- paste("Error in", dcall, ": ") > LONG <- 75L msg <- conditionMessage(e) sm <- strsplit(msg, > "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type > = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") > + nchar(sm[1L], type = "b") if (w > > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- > "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") > .Internal(seterrmessage(msg[1L])) if (!silent && > identical(getOption("show.error.messages"), TRUE)) { > cat(msg, file = stderr()) .Internal(printDeferredWarnings()) } > invisible(structure(msg, class = "try-error", condition = e))}) > 13: try({ ns <- loadNamespace(package, c(which.lib.loc, lib.loc)) env > <- attachNamespace(ns, pos = pos, deps)}) > 14: library("ggplot2") > > Possible actions: > 1: abort (with core dump, if enabled) > 2: normal R exit > 3: exit R without saving workspace > 4: exit R saving workspace > Selection: > > [[alternative HTML version deleted]] > > _______________________________________________ > R-SIG-Mac mailing list > [email protected] > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > _______________________________________________ R-SIG-Mac mailing list [email protected] https://stat.ethz.ch/mailman/listinfo/r-sig-mac
