Thank you very much Ben. But I am trying to make an update, not a first time installation. The older sf version is running fine.
Manuel 2018-01-15 10:40 GMT-06:00 Ben Tupper <btup...@bigelow.org>: > Hi, > > sf (and many other spatial packages) depend upon gdal ( > http://www.gdal.org/) being installed on your platform. Your message > says it can't find the gdal-config utility, "checking for gdal-config... > no". You can install it following these instructions... > > https://trac.osgeo.org/gdal/wiki/DownloadingGdalBinaries > > I'm not sure about the other packages you list. > > Cheers, > Ben > > > > On Jan 15, 2018, at 11:25 AM, Manuel Spínola <mspinol...@gmail.com> wrote: > > I am still having problems updating some packages, for example, > > sf > Hmisc > rms > mgcv > RcmdrMisc > > Same messages that I showed in my first email. > > Manuel > > > 2018-01-11 12:17 GMT-06:00 Simon Urbanek <simon.urba...@r-project.org>: > > Manuel, > > the archiving on CRAN has changed recently which broke the updates so > recently the update for macOS packages have been suspended. Hence some most > recent binaries is not available yet - it should be up by tomorrow. > > Cheers, > Simon > > > > On Jan 11, 2018, at 12:26 PM, Manuel Spínola <mspinol...@gmail.com> > > wrote: > > > Dear list members, > > When trying updating some packages in MacOS High Sierra 10.13 (R 3.4.2) > some packages, as "sf", fails: > > install.packages("sf") > > > There is a binary version available but the source version is later: > binary source needs_compilation > sf 0.5-5 0.6-0 TRUE > > Do you want to install from sources the package which needs compilation? > y/n: y > > installing the source package ‘sf’ > > trying URL 'https://cran.rstudio.com/src/contrib/sf_0.6-0.tar.gz' > Content type 'application/x-gzip' length 7399611 bytes (7.1 MB) > ================================================== > downloaded 7.1 MB > > Warning in strptime(xx, f <- "%Y-%m-%d %H:%M:%OS", tz = tz) : > unknown timezone 'default/America/Costa_Rica' > * installing *source* package ‘sf’ ... > ** package ‘sf’ successfully unpacked and MD5 sums checked > configure: CC: clang > configure: CXX: clang++ > checking for gdal-config... no > no > configure: error: gdal-config not found or not executable. > ERROR: configuration failed for package ‘sf’ > * removing > ‘/Library/Frameworks/R.framework/Versions/3.4/Resources/library/sf’ > * restoring previous > ‘/Library/Frameworks/R.framework/Versions/3.4/Resources/library/sf’ > Warning in install.packages : > installation of package ‘sf’ had non-zero exit status > > The downloaded source packages are in > ‘/private/var/folders/gf/vwlbzml90wv7cs2r4v00wg_m0000gn/T/RtmpbmvcCh/ > > downloaded_packages’ > > > > > Any solution to this problem? > > Manuel > > -- > *Manuel Spínola, Ph.D.* > Instituto Internacional en Conservación y Manejo de Vida Silvestre > Universidad Nacional > Apartado 1350-3000 > Heredia > COSTA RICA > mspin...@una.cr <mspin...@una.ac.cr> > mspinol...@gmail.com > Teléfono: (506) 8706 - 4662 > Personal website: Lobito de río <https://sites.google.com/ > > site/lobitoderio/> > > Institutional website: ICOMVIS <http://www.icomvis.una.ac.cr/> > > [[alternative HTML version deleted]] > > _______________________________________________ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > > > > > > -- > *Manuel Spínola, Ph.D.* > Instituto Internacional en Conservación y Manejo de Vida Silvestre > Universidad Nacional > Apartado 1350-3000 > Heredia > COSTA RICA > mspin...@una.cr <mspin...@una.ac.cr> > mspinol...@gmail.com > Teléfono: (506) 8706 - 4662 > Personal website: Lobito de río <https://sites.google.com/ > site/lobitoderio/> > Institutional website: ICOMVIS <http://www.icomvis.una.ac.cr/> > > [[alternative HTML version deleted]] > > _______________________________________________ > R-SIG-Mac mailing list > R-SIG-Mac@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-mac > > > Ben Tupper > Bigelow Laboratory for Ocean Sciences > 60 Bigelow Drive > <https://maps.google.com/?q=60+Bigelow+Drive&entry=gmail&source=g>, P.O. > Box 380 > East Boothbay, Maine 04544 > http://www.bigelow.org > > Ecocast Reports: http://seascapemodeling.org/ecocast.html > Tick Reports: https://report.bigelow.org/tick/ > Jellyfish Reports: https://jellyfish.bigelow.org/jellyfish/ > > > > -- *Manuel Spínola, Ph.D.* Instituto Internacional en Conservación y Manejo de Vida Silvestre Universidad Nacional Apartado 1350-3000 Heredia COSTA RICA mspin...@una.cr <mspin...@una.ac.cr> mspinol...@gmail.com Teléfono: (506) 8706 - 4662 Personal website: Lobito de río <https://sites.google.com/site/lobitoderio/> Institutional website: ICOMVIS <http://www.icomvis.una.ac.cr/> [[alternative HTML version deleted]] _______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac