I think the cleanest way is to diddle the /etc/paths.d structure. I have PeterDaardsiMac:R pd$ ls /etc/paths.d 40-XQuartz R TeX clang8 gfortran PeterDaardsiMac:R pd$ cat /etc/paths.d/gfortran /usr/local/gfortran/bin PeterDaardsiMac:R pd$ cat /etc/paths /usr/local/bin /usr/bin /bin /usr/sbin /sbin
and the latter would want to be /opt/gfortran/bin for 12.2 (I still have 8.2 for now). Two things to note: 1. The directories in paths.d/* are added to those in /etc/paths in alphabetical order, so careful with older versions in /usr/local/bin. 2. You (probably) need to logout and back in for the changes to take effect in your Terminal windows. Alternatively, you can twiddle the shell startup files (~/.profile /etc/profile /etc/bashrc ....) directly. The trouble I have with that, is that I never feel sure that I am doing it in the right place. - Peter D. > On 6 Jul 2023, at 19:58 , Spencer Graves <spencer.gra...@prodsyse.com> wrote: > > 1. I need to apologize to Simon: I failed to see his reply to the original > post. Then I found the instructions and installed > gfortran-12.2-universal.pkg, as indicated there, but it still didn't work. > > > 2. I'm not finding clear instructions on how to update the path on macOS > 11.7.8, which is the latest version available for my 2014 MacBook Pro with a > 2.8 GHz Quad-Core Intel Core i7. I found several pages with differing > instructions. I found one in "support.apple.com" that recommended something > that didn't work.[2] > > > Further suggestions? > > > Thanks again very much. > Spencer Graves > > > [2] "support.apple.com" recommended > "PATH=/bin:/sbin:/user/bin:/user/sbin:/system/Library/ export PATH", then > "env". I did "env" to get the current path, than appended > ":/opt/gfortran/bin" to that and executed the revised > "PATH=...:/opt/gfortran/bin export PATH". However, when I checked with "env" > again, the change was not displayed. I rebooted with the same result. > > > https://support.apple.com/guide/terminal/use-environment-variables-apd382cc5fa-4f58-4449-b20a-41c53c006f8f/mac > > > On 7/6/23 11:01 AM, Simon Urbanek wrote: >> AFACT he didn't say so, there was no response, just double-posting of the >> same question after is was answered. >> The installer says: >> The resulting compiler will live in /opt/gfortran and can be called with >> /opt/gfortran/bin/gfortran >> so it's advisable to have /opt/gfortran/bin on the PATH. >> (Side note: the arm64 build of R uses the full path, but some people have >> been objecting to that since they wanted to use other compilers for the >> legacy Intel builds, but as I suspected that causes other issues, so I'll >> change that for the next release). >> Cheers, >> Simon >>> On Jul 6, 2023, at 11:45 PM, Peter Dalgaard <pda...@gmail.com >>> <mailto:pda...@gmail.com>> wrote: >>> >>> AFAICT, Spencer followed the implied instructions and it still didn't work. >>> >>> There may also be a PATH issue when upgrading to 4.3.x, /usr/local -> >>> /opt/R/<arch> Does gfortran 12.2 install to /opt/R/.../bin ? >>> >>> -pd >>> >>>> On 6 Jul 2023, at 07:42 , Simon Urbanek <simon.urba...@r-project.org >>>> <mailto:simon.urba...@r-project.org>> wrote: >>>> >>>> Already answered to you and on R-pkg-devel [9 mins after you posted there >>>> - now more than 5h ago...]: >>>> >>>> To quote from the page you downloaded R from: >>>> >>>> This release uses Xcode 14.2/14.3 and GNU Fortran 12.2. If you wish to >>>> compile R packages which contain Fortran code, you may need to download >>>> the corresponding GNU Fortran compiler from >>>> https://mac.R-project.org/tools <https://mac.R-project.org/tools> >>>> <https://mac.r-project.org/tools <https://mac.r-project.org/tools>>. >>>> >>>> >>>> >>>>> On Jul 6, 2023, at 5:16 PM, Spencer Graves <spencer.gra...@prodsyse.com >>>>> <mailto:spencer.gra...@prodsyse.com>> wrote: >>>>> >>>>> Hello, All: >>>>> >>>>> >>>>> "R CMD check KFAS" under macOS 11.7.8 (the latest version that will run >>>>> on my aging Mac) complains "gfortran: command not found". >>>>> >>>>> >>>>> I just upgraded to R 4.3.1 and installed "gfortran-12.2-universal.pkg" >>>>> per >>>>> "https://cran.r-project.org/bin/macosx/tools/<https://cran.r-project.org/bin/macosx/tools/>". >>>>> I expected this to solve the problem. It didn't. >>>>> >>>>> >>>>> Suggestions? >>>>> Thanks, >>>>> Spencer Graves >>>>> >>>>> >>>>> p.s. This is my fork of KFAS, available at >>>>> "https://github.com/sbgraves237/KFAS >>>>> <https://github.com/sbgraves237/KFAS>". "sessionInfo()" appears below. >>>>> >>>>> >>>>> ########## >>>>> >>>>> >>>>> sessionInfo() >>>>> R version 4.3.1 (2023-06-16) >>>>> Platform: x86_64-apple-darwin20 (64-bit) >>>>> Running under: macOS Big Sur 11.7.8 >>>>> >>>>> Matrix products: default >>>>> BLAS: >>>>> /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib >>>>> LAPACK: >>>>> /Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/lib/libRlapack.dylib; >>>>> LAPACK version 3.11.0 >>>>> >>>>> locale: >>>>> [1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8 >>>>> >>>>> time zone: America/Chicago >>>>> tzcode source: internal >>>>> >>>>> attached base packages: >>>>> [1] stats graphics grDevices utils datasets methods base >>>>> >>>>> loaded via a namespace (and not attached): >>>>> [1] compiler_4.3.1 R6_2.5.1 magrittr_2.0.3 cli_3.6.1 >>>>> [5] tools_4.3.1 glue_1.6.2 rstudioapi_0.14 roxygen2_7.2.3 >>>>> [9] xml2_1.3.4 vctrs_0.6.2 stringi_1.7.12 knitr_1.42 >>>>> [13] xfun_0.39 stringr_1.5.0 lifecycle_1.0.3 rlang_1.1.1 >>>>> [17] purrr_1.0.1 >>>>>> >>>>> >>>>> _______________________________________________ >>>>> R-SIG-Mac mailing list >>>>> R-SIG-Mac@r-project.org <mailto:R-SIG-Mac@r-project.org> >>>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>>>> >>>> >>>> >>>> [[alternative HTML version deleted]] >>>> >>>> _______________________________________________ >>>> R-SIG-Mac mailing list >>>> R-SIG-Mac@r-project.org <mailto:R-SIG-Mac@r-project.org> >>>> https://stat.ethz.ch/mailman/listinfo/r-sig-mac >>> >>> -- >>> Peter Dalgaard, Professor, >>> Center for Statistics, Copenhagen Business School >>> Solbjerg Plads 3, 2000 Frederiksberg, Denmark >>> Phone: (+45)38153501 >>> Office: A 4.23 >>> Email: pd....@cbs.dk <mailto:pd....@cbs.dk> Priv: pda...@gmail.com >>> <mailto:pda...@gmail.com> -- Peter Dalgaard, Professor, Center for Statistics, Copenhagen Business School Solbjerg Plads 3, 2000 Frederiksberg, Denmark Phone: (+45)38153501 Office: A 4.23 Email: pd....@cbs.dk Priv: pda...@gmail.com _______________________________________________ R-SIG-Mac mailing list R-SIG-Mac@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-mac
