Hi all !
I just installed Mac OS X 10.5.1 on my Intel MacBook Pro. Since I have my
personal packages that I build and modify every so often I also installed
Xcode 3. My packages contain either some C code, some Fortran code or both.
However, I can not build a binary of my package, which I know to be
error-free since they were running without any bugs when I was running Tiger
(Mac OS 10.4.11).
The message that is sent to me when I launch the command "R CMD build
--binary AEM" (AEM being the name of my package) in the terminal is:
macintosh:AEM Package ti-guiblanc$ R CMD build --binary AEM
* checking for file 'AEM/DESCRIPTION' ... OK
* preparing 'AEM':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* removing junk files
* checking for LF line-endings in source and make files
* checking for empty or unneeded directories
* building binary distribution
/var/folders/+5/+5Ch2A6BEb4+iULWkg5XEU+++TI/-Tmp-/Rinst965351719
* Installing *source* package 'AEM' ...
** libs
** arch - i386
gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk
-mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp
-I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/i386 -msse3 -fPIC
-g -O2 -march=nocona -c buildbinary.c -o buildbinary.o
gcc -arch i386 -isysroot /Developer/SDKs/MacOSX10.4u.sdk
-mmacosx-version-min=10.4 -std=gnu99 -dynamiclib
-Wl,-headerpad_max_install_names -Wl,-macosx_version_min -Wl,10.4 -undefined
dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o
AEM.so buildbinary.o -F/Library/Frameworks/R.framework/.. -framework R
ld: warning, duplicate dylib
/Developer/SDKs/MacOSX10.4u.sdk/usr/local/lib/libgcc_s.1.dylib
** arch - ppc
gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk
-mmacosx-version-min=10.4 -std=gnu99 -no-cpp-precomp
-I/Library/Frameworks/R.framework/Resources/include
-I/Library/Frameworks/R.framework/Resources/include/ppc
-I/usr/local/include -fPIC -g -O2 -c buildbinary.c -o buildbinary.o
gcc -arch ppc -isysroot /Developer/SDKs/MacOSX10.4u.sdk
-mmacosx-version-min=10.4 -std=gnu99 -dynamiclib
-Wl,-headerpad_max_install_names -Wl,-macosx_version_min -Wl,10.4 -undefined
dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -o
AEM.so buildbinary.o -F/Library/Frameworks/R.framework/.. -framework R
ld: warning, duplicate dylib
/Developer/SDKs/MacOSX10.4u.sdk/usr/local/lib/libgcc_s.1.dylib
ld: in /Developer/SDKs/MacOSX10.4u.sdk/usr/local/lib/libstdc++.6.dylib, file
is not of required architecture
collect2: ld returned 1 exit status
make: *** [AEM.so] Error 1
chmod:
/var/folders/+5/+5Ch2A6BEb4+iULWkg5XEU+++TI/-Tmp-/Rinst965351719/AEM/libs/ppc/*:
No such file or directory
ERROR: compilation failed for package 'AEM'
** Removing
'/var/folders/+5/+5Ch2A6BEb4+iULWkg5XEU+++TI/-Tmp-/Rinst965351719/AEM'
ERROR
* installation failed
My knowledge of the UNIX code and the terminal is limited, so please be
gentle !
Thanks in advance for any help.
Have a nice day !
Guillaume Blanchet
PhD. candidate
University of Alberta
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