Dear all,
Does anyone know of a script to run ancestral state reconstruction
for discrete characters using R, under the "parsimony" criterion? The
function ace () in ape can only do maximum likelihood for discrete
characters.
Alternatively, I have been thinking of running a parsimony
reconstruction in Mesquite, then import the results into R for further
analyses. Does anyone have a script to produce a translation table
between node numbers in Mesquite vs. their node numbers in R?
Thanks a lot for any help or suggestions!
Alex
Dr Alexandre Antonelli
Institute of Systematic Botany
Zollikerstrasse 107
CH 8008 Zürich
Switzerland
Phone: +41 (0)44 634 8416
Mobile: + 41 (0) 76 7345116
[email protected]
http://www.systbot.uzh.ch/Personen/PostdoktorandInnen/AlexandreAntonelli.html
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