Thanks everyone, exactly what I needed! Went ahead and used threshBayes since I only have two characters, and indeed 95% HPD of r was > 0 (ESS > 1,000). Thanks so much for all the advice! Sean
On Sat, Apr 9, 2016 at 11:23 AM, Joe Felsenstein <j...@gs.washington.edu> wrote: > Liam -- > > Thanks, I had a "senior moment" and have been corrected: Rphylip, not > Phytools. > > Joe > ---- > Joe Felsenstein j...@gs.washington.edu > Department of Genome Sciences and Department of Biology, > University of Washington, Box 355065, Seattle, WA 98195-5065 USA > > [[alternative HTML version deleted]] > > _______________________________________________ > R-sig-phylo mailing list - R-sig-phylo@r-project.org > https://stat.ethz.ch/mailman/listinfo/r-sig-phylo > Searchable archive at > http://www.mail-archive.com/r-sig-phylo@r-project.org/ > [[alternative HTML version deleted]] _______________________________________________ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/