On 14 February 2012 at 21:05, Patrick Burns wrote:
| On 14/02/2012 20:59, Dirk Eddelbuettel wrote:
| >
| > (resending with CC to list which I omitted a minute ago --Dirk)
| >
| > On 14 February 2012 at 20:47, Patrick Burns wrote:
| > |
| > |
| > | On 14/02/2012 20:14, Dirk Eddelbuettel wrote:
| > |>
| > |> On 14 February 2012 at 20:04, Patrick Burns wrote:
| > |> | Obviously I don't *really* know what I'm
| > |> | doing, or even *sort of* know what I'm
| > |> | doing. But that never stopped me before.
| > |> |
| > |> | Here is hopefully enough breadcrumbs to
| > |> | help someone, or even all of us.
| > |> |
| > |> |
| > |> | I've reinstalled RInside so that I am
| > |> | starting with the original Makefile.win
| > |> |
| > |> | *) There is an extraneous "n" on the first
| > |> | line (first character) of Makefile.win -- 'make'
| > |> | doesn't like that.
| > |>
| > |> I don't know for sure what your are talking about. A common fix would
be to
| > |> send a diff. Could you do that?
| > |
| > | This is Windows, remember -- perhaps there is a
| >
| > This is R, remember, and these tools come with Rtools by Duncan Murdoch.
| >
| > | way of doing a diff, I don't know it. But the
| > | start of Makefile.win that I see out of the box is:
| > |
| > | n## -*- mode: makefile; tab-width: 8; -*-
| > | ##
| > | ## Simple Makefile for Windows
| > |
| > | Note the bizarre first character.
| >
| > Got it. Was still present here. Sorry about that, and thanks for catching
it.
| >
| > Next release will fix, now corrected in SVN.
| >
| > |> | *) I need to comment out the command setting
| > |> | R_HOME and set it in DOS instead.
| > |>
| > |> Works for me in the Makefile.win
| > |>
| > |> | *) The next problem is two instances each of:
| > |> |
| > |> | there is no package called [Rcpp, RInside]
| > |> |
| > |> | This is because .libPaths() is only finding
| > |> | the main library and not the one where the
| > |> | installed packages go.
| > |> |
| > |> | This is diagnosed by adding a line to Makefile.win:
| > |> |
| > |> | Rlibpaths := $(shell echo '.libPaths()' | $(R_HOME)/bin/R
$(R_ARCH)
| > |> | --vanilla --slave)
| > |>
| > |> I would recommend using ~/.Rprofile which strikes me as easier.
| > |>
| > |> | Adding a line to the checkR task:
| > |> |
| > |> | echo $(Rlibpaths)
| > |> |
| > |> | And then doing:
| > |> |
| > |> | make checkR -f Makefile.win
| > |> |
| > |> | This is the same in 32-bit and 64-bit.
| > |> |
| > |> | This problem can be remedied by setting the
| > |> | R_LIBS_USER environment variable. You can
| > |> | see what that is with the R command:
| > |> |
| > |> | Sys.getenv('R_LIBS_USER')
| > |> |
| > |> |
| > |> | *) Now there is some progress, but not much.
| > |> |
| > |> | It compiles:
| > |> | rinside_callbacks0
| > |> | rinside_module_sample0
| > |> | rinside_sample0
| > |>
| > |> Can you run rinside_sample0.exe ?
| >
| > Does that run?
|
| There is the missing R.dll problem.
That is "just" a PATH problem. For now, copy this dll (and there will be
four or five more from R, and then possibly from Rcpp and RInside) into a
working (temp) directory and try.
Seeing "hello, world" is a good proof. The rest is setup issues, which on
Windows often descend into man-to-machine combat.
Dirk
| >
| > |> | And gets an error on rinside_sample1:
| > |> |
| > |> | reopening rinside_sample1.exe: Permission denied
| > |>
| > |> Huh?
| > |
| > | Agreed. That is the only indication of it
| > | being upset.
| > |
| > | But I renamed that file to try to make it do it last.
| > | Running it again there was no error -- everything
| > | compiled.
| > |
| > | Compiled for 32-bit.
| > |
| > | There is not an x64 subdirectory to 'lib' (as there is
| > | with 'libs') so nothing compiles.
| >
| > Are you talking about RInside or Rcpp? Did you install from source or via
| > the prebuilt CRAN binary?
| >
| > Everything from CRAN should now be multiarch, 32 and 64 bit.
|
| Prebuilt from CRAN. Rcpp is fine,
| RInside/lib/x64 went AWOL.
|
| Pat
|
| >
| > Dirk
| >
| > |> | However the three that did compile don't run. They
| > |> | all have the error message:
| > |> |
| > |> | The program can't start because R.dll is missing from
| > |> | your computer. Try reinstalling the program to fix
| > |> | this problem.
| > |>
| > |> Could that be a Win7 security setting or something like it?
| > |
| > | That's an interesting idea. Anyone have
| > | ideas about testing it?
| > |
| > | Pat
| > |
| > |>
| > |> | This is using Rtools2.14 and R 2.14.1 with
| > |> | RInside_0.2.6 Rcpp_0.9.9
| > |>
| > |> I think I used the same combination with success.
| > |>
| > |> Dirk
| > |>
| > |>
| > |> | Pat
| > |> |
| > |> | On 14/02/2012 17:53, Dirk Eddelbuettel wrote:
| > |> |>
| > |> |> Hi Pat,
| > |> |>
| > |> |> On 14 February 2012 at 17:43, Patrick Burns wrote:
| > |> |> | Good point about the Rtools version. I started
| > |> |> | with 2.13, but I get the same thing with 2.14.
| > |> |> |
| > |> |> | Here are the key changes that I made to Makefile.win:
| > |> |> |
| > |> |> | RCPPINCL :=
-IC:/Users/pat/Documents/R/win-library/2.14/Rcpp/include
| > |> |> | RCPPLIBS :=
| > |> |> | C:/Users/pat/Documents/R/win-library/2.14/Rcpp/libs/i386/Rcpp.dll
| > |> |> |
| > |> |> | RINSIDEINCL :=
-IC:/Users/pat/Documents/R/win-library/2.14/RInside/include
| > |> |> | RINSIDELIBS :=
| > |> |> |
C:/Users/pat/Documents/R/win-library/2.14/RInside/libs/i386/libRInside.dll
| > |> |>
| > |> |> That's not quite right, is it? What do (quoting from
examples/standard/Makefile.win)
| > |> |> these do:
| > |> |>
| > |> |> ## include headers and libraries for RInside embedding classes
| > |> |> RINSIDEINCL := $(shell echo 'RInside:::CxxFlags()' |
$(R_HOME)/bin/R $(R_ARCH) --vanilla --slave)
| > |> |> RINSIDELIBS := $(shell echo 'RInside:::LdFlags()' |
$(R_HOME)/bin/R $(R_ARCH) --vanilla --slave)
| > |> |>
| > |> |> | I then do:
| > |> |> |
| > |> |> | make -f Makefile.win
| > |> |> |
| > |> |> | I seem to have failed in my attempt to
| > |> |> | tell it where R lives -- I get a cygwin
| > |> |> | warning about MS-DOS style path, but I
| > |> |> | don't think that is really a problem.
| > |> |>
| > |> |> R_HOME must be defined. You can get it from R, or hardcode it.
| > |> |>
| > |> |> The single best start is to try
| > |> |>
| > |> |> cd examples/standard
| > |> |> make -f Makefile.win
| > |> |>
| > |> |> which should create 10+ executable. And you can borrow freely from
that
| > |> |> Makefile.win which should work.
| > |> |>
| > |> |> Lastly, the Cygwin thing is line noise which you can suppress by
setting an
| > |> |> env var appropriately. This comes from the newer Rtools.
| > |> |>
| > |> |> | It then attempts the g++ command, gives
| > |> |> | the multiple definition statements, and:
| > |> |>
| > |> |> Linking is still wrong then.
| > |> |>
| > |> |> Dirk
| > |> |>
| > |> |>
| > |> |
| > |> | --
| > |> | Patrick Burns
| > |> | patr...@burns-stat.com
| > |> | http://www.burns-stat.com
| > |> | http://www.portfolioprobe.com/blog
| > |> | twitter: @portfolioprobe
| > |>
| > |
| > | --
| > | Patrick Burns
| > | patr...@burns-stat.com
| > | http://www.burns-stat.com
| > | http://www.portfolioprobe.com/blog
| > | twitter: @portfolioprobe
| >
|
| --
| Patrick Burns
| patr...@burns-stat.com
| http://www.burns-stat.com
| http://www.portfolioprobe.com/blog
| twitter: @portfolioprobe
--
"Outside of a dog, a book is a man's best friend. Inside of a dog, it is too
dark to read." -- Groucho Marx
_______________________________________________
Rcpp-devel mailing list
Rcpp-devel@lists.r-forge.r-project.org
https://lists.r-forge.r-project.org/cgi-bin/mailman/listinfo/rcpp-devel
