Hi, I applied the patch but it's still the same problem. How can I specify that I want to use the agg canvas instead of cairo?
++ Peter On 29/07/2010, at 12:01, Uwe Hoffmann wrote: > Hi, > > is it possible that you use cairo (canvas) and not agg (canvas) ? > Maybe I made an error with the "cairo colours". > > In case you use cairo apply the following patch and test again (I'm not able > to test it right now). > > --- rdkit/Chem/Draw/cairoCanvas.py (Revision 1467) > +++ rdkit/Chem/Draw/cairoCanvas.py (Arbeitskopie) > @@ -100,7 +100,7 @@ > > > def convertColor(color): > - color = (int(color[0]*255),int(color[1]*255),int(color[2]*255)) > + color = (color[0],color[1],color[2]) #whole function overfluous > return color > > def _getLinePoints(p1,p2,dash): > > regards > Uwe > > Am Donnerstag, den 29.07.2010, 11:09 +0200 schrieb Peter Schmidtke: >> Ah, >> >> interesting, I thought it was intended to be so :) >> >> I use the following code : >> >> import rdkit.Chem as chem, rdkit.Chem.Draw as chemDraw >> >> ligand=chem.MolFromSmiles(smilesCode) >> >> if ligand: >> chemDraw.MolToImageFile(ligand,tmpdir+os.sep+"test.gif", size=(250, >> 98), kekulize=True, wedgeBonds=True) >> >> >> >> I did not try on other systems, but this happens on a opensuse 11.1 64 bit, >> with rdkit q4 2009 and boost 1.41 >> >> I'll check on my mac as soon as I get rdkit installed if that problems >> occurs there also :) >> >> Cheers. >> >> Peter >> >> >> On 29/07/2010, at 11:03, Greg Landrum wrote: >> >>> On Thu, Jul 29, 2010 at 9:23 AM, Peter Schmidtke <[email protected]> wrote: >>>> Hey all, >>>> >>>> I always wondered, why colours in the 2D depictions in Rdkit are red for >>>> nitrogens and blue for oxygens? >>>> >>> >>> I would also wonder if I saw something like that. It doesn't happen >>> for me though. How are you generating depictions? >>> >>> -greg >> >> Peter Schmidtke >> >> ----------------- >> PhD Student >> Department of Physical Chemistry >> School of Pharmacy >> University of Barcelona >> Barcelona, Spain >> >> >> ------------------------------------------------------------------------------ >> The Palm PDK Hot Apps Program offers developers who use the >> Plug-In Development Kit to bring their C/C++ apps to Palm for a share >> of $1 Million in cash or HP Products. Visit us here for more details: >> http://p.sf.net/sfu/dev2dev-palm >> _______________________________________________ >> Rdkit-discuss mailing list >> [email protected] >> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss > > > > > ------------------------------------------------------------------------------ > The Palm PDK Hot Apps Program offers developers who use the > Plug-In Development Kit to bring their C/C++ apps to Palm for a share > of $1 Million in cash or HP Products. Visit us here for more details: > http://p.sf.net/sfu/dev2dev-palm > _______________________________________________ > Rdkit-discuss mailing list > [email protected] > https://lists.sourceforge.net/lists/listinfo/rdkit-discuss Peter Schmidtke ----------------- PhD Student Department of Physical Chemistry School of Pharmacy University of Barcelona Barcelona, Spain ------------------------------------------------------------------------------ The Palm PDK Hot Apps Program offers developers who use the Plug-In Development Kit to bring their C/C++ apps to Palm for a share of $1 Million in cash or HP Products. Visit us here for more details: http://p.sf.net/sfu/dev2dev-palm _______________________________________________ Rdkit-discuss mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
