Hi Igor, On Wed, Jan 5, 2011 at 9:15 PM, Igor Filippov [Contr] <[email protected]> wrote: > Dear All, > > Has anyone successfully compiled RDKit on CentOs 5? I'm running into the > following error message: > [ 15%] Building CXX object > > Code/Numerics/Alignment/Wrap/CMakeFiles/rdAlignment.dir/rdAlignment.cpp.o > > /root/RDKit_2010_09_1/Code/Numerics/Alignment/Wrap/rdAlignment.cpp:14:31: > error: numpy/arrayobject.h: No such file or directory > > On CentOs 5 arrayobject.h is part of python-numeric package and it's > located in: > /usr/include/python2.4/Numeric/arrayobject.h
The default version of python that comes with centos and RHEL systems is python2.4. This is really too old for effective use of the RDKit python bindings. It's really best if you install python 2.6 or 2.7. If you don't want to use the python bindings, you can tell cmake not to build them and the above problem will go away. Best, -greg ------------------------------------------------------------------------------ Learn how Oracle Real Application Clusters (RAC) One Node allows customers to consolidate database storage, standardize their database environment, and, should the need arise, upgrade to a full multi-node Oracle RAC database without downtime or disruption http://p.sf.net/sfu/oracle-sfdevnl _______________________________________________ Rdkit-discuss mailing list [email protected] https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
