Hello, On Mon, Jul 23, 2012 at 10:35 AM, Gonzalo Colmenarejo-Sanchez <gonzalo.2.colmenar...@gsk.com> wrote: > I’m trying to run a program that calculates a similarity matrix that worked > in the previous RDKit release. Now I recompile with the new release: > > g++ -o tanird tanird.cpp -I$RDBASE/Code -I$RDBASE/Extern -L$RDBASE/lib > -lChemReactions -lFileParsers -lSmilesParse -lDepictor -lSubstructMatch > -lGraphMol -lDataStructs -lRDGeometryLib -lRDGeneral -lFingerprints > -I/GWD/schem/apps/rdkit/build-env/include > > but when I run it I get the following error message: > > ../../../bin/tanird: symbol lookup error: ../../../bin/tanird: undefined > symbol: _ZN5RDKit17RDKFingerprintMolERKNS_5ROMolEjjjjbdjbbPSt6vectorIjSaIjEE
I think one possible explanation for the error message is that you built the executable linking against a library version which is not the same that is used at program execution. I would check the output from running "ldd ../../../bin/tanird" and eventually the value of LD_LIBRARY_PATH in the same environment. Best Regards, Riccardo ------------------------------------------------------------------------------ Live Security Virtual Conference Exclusive live event will cover all the ways today's security and threat landscape has changed and how IT managers can respond. Discussions will include endpoint security, mobile security and the latest in malware threats. http://www.accelacomm.com/jaw/sfrnl04242012/114/50122263/ _______________________________________________ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
