Trying to 'conda build rdkit' as described in the
https://github.com/rdkit/conda-rdkit README to no success. Are there any
OSX 'conda build' instructions tucked away somewhere?
It's currently failing on the cairo dependency:
-- Checking for one of the modules 'cairo'
CMake Error at
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/_h_env_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_placehold_place/share/cmake-3.9/Modules/FindPkgConfig.cmake:640
(message):
None of the required 'cairo' found
Call Stack (most recent call first):
Code/cmake/Modules/FindCairo.cmake:23 (PKG_SEARCH_MODULE)
Code/GraphMol/MolDraw2D/CMakeLists.txt:31 (find_package)
CMake Error at Code/cmake/Modules/FindCairo.cmake:38 (MESSAGE):
Could not find Cairo
Call Stack (most recent call first):
Code/GraphMol/MolDraw2D/CMakeLists.txt:31 (find_package)
-- Boost version: 1.56.0
-- Found the following Boost libraries:
-- regex
CMake Error: The following variables are used in this project, but they are
set to NOTFOUND.
Please set them or make sure they are set and tested correctly in the CMake
files:
CAIRO_INCLUDE_DIRS (ADVANCED)
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D/Wrap
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D/Wrap
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D/Wrap
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D/Wrap
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D/Wrap
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D/Wrap
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D/Wrap
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D/Wrap
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D/Wrap
used as include directory in directory
/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/Code/GraphMol/MolDraw2D/Wrap
-- Configuring incomplete, errors occurred!
See also
"/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/CMakeFiles/CMakeOutput.log".
Traceback (most recent call last):
File "/Users/coleb/anaconda2/bin/conda-build", line 11, in <module>
sys.exit(main())
File
"/Users/coleb/anaconda2/lib/python2.7/site-packages/conda_build/cli/main_build.py",
line 388, in main
execute(sys.argv[1:])
File
"/Users/coleb/anaconda2/lib/python2.7/site-packages/conda_build/cli/main_build.py",
line 379, in execute
noverify=args.no_verify)
File
"/Users/coleb/anaconda2/lib/python2.7/site-packages/conda_build/api.py",
line 185, in build
need_source_download=need_source_download, config=config,
variants=variants)
File
"/Users/coleb/anaconda2/lib/python2.7/site-packages/conda_build/build.py",
line 1771, in build_tree
notest=notest,
File
"/Users/coleb/anaconda2/lib/python2.7/site-packages/conda_build/build.py",
line 1121, in build
utils.check_call_env(cmd, env=env, cwd=src_dir)
File
"/Users/coleb/anaconda2/lib/python2.7/site-packages/conda_build/utils.py",
line 678, in check_call_env
return _func_defaulting_env_to_os_environ(subprocess.check_call,
*popenargs, **kwargs)
File
"/Users/coleb/anaconda2/lib/python2.7/site-packages/conda_build/utils.py",
line 674, in _func_defaulting_env_to_os_environ
return func(_args, **kwargs)
File "/Users/coleb/anaconda2/lib/python2.7/subprocess.py", line 541, in
check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['/bin/bash', '-x', '-e',
'/Users/coleb/anaconda2/conda-bld/rdkit_1514412408124/work/conda_build.sh']'
returned non-zero exit status 1
-Brian
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