Dear Greg, After activating my enviroment (foodpains) I wrote the command " ipython -c 'import IPython;import rdkit;print(IPython.__file__,rdkit.__file__)' ". Right after getting the output I wrote: " where ipython ". This is what I get:
(foodpains) C:\Users\Andres Sanchez>ipython -c "import IPython;import rdkit;print(IPython.__file__,rdkit.__file__)" C:\Anaconda\envs\foodpains\lib\site-packages\IPython\__init__.py C:\Anaconda\envs\foodpains\lib\site-packages\rdkit\__init__.py (foodpains) C:\Users\Andres Sanchez>where ipython C:\Anaconda\envs\foodpains\Scripts\ipython.exe C:\Anaconda\Scripts\ipython.exe Best regards, Andrés El mié, 14 abr 2021 a las 17:06, Greg Landrum (<greg.land...@gmail.com>) escribió: > > That looks good. Please send the output of: > ipython -c 'import IPython;import > rdkit;print(IPython.__file__,rdkit.__file__)' > > and we also need to figure out exactly which version of ipython you are > running. > > If you are running these commands in the command shell, that's > where ipython > > in powershell: > gcm ipython > > if you're using a bash shell: > which ipython > > Please run the ipython -c and which/where/gcm command directly after each > other and paste in both the command you executed and its output. > > -greg > > > > > On Wed, Apr 14, 2021 at 4:46 PM Andrés Sánchez Ruiz > <andressanchezrui...@gmail.com> wrote: >> >> Dear Greg, >> >> This is what I see after activating my enviroment (foodpains) and >> introducing your command: >> >> C:\Anaconda\envs\foodpains\lib\site-packages\IPython\__init__.py >> C:\Anaconda\envs\foodpains\lib\site-packages\rdkit\__init__.py >> >> Best regards, >> >> Andrés >> >> El mié, 14 abr 2021 a las 15:42, Greg Landrum >> (<greg.land...@gmail.com>) escribió: >> > >> > What do you see when you execute this quick test to ensure that ipython >> > and the rdkit are both really installed? >> > >> > python -c 'import IPython;import >> > rdkit;print(IPython.__file__,rdkit.__file__)' >> > >> > -greg >> > >> > On Wed, Apr 14, 2021 at 2:58 PM Andrés Sánchez Ruiz >> > <andressanchezrui...@gmail.com> wrote: >> >> >> >> Hello, >> >> >> >> I have not been able to solve the issue yet after installing ipython >> >> in the same enviroment in which I have RDKIT. >> >> >> >> ipython 7.22.0 py39hd4e2768_0 >> >> ipython_genutils 0.2.0 pyhd3eb1b0_1 >> >> . >> >> . >> >> . >> >> rdkit 2021.03.1 py39hfadf033_0 conda-forge >> >> >> >> From this enviroment I can call pandas (for example) but not RDKIT. >> >> What is still not working? >> >> >> >> Best regards, >> >> >> >> Andrés >> >> >> >> >> >> _______________________________________________ >> >> Rdkit-discuss mailing list >> >> Rdkit-discuss@lists.sourceforge.net >> >> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss _______________________________________________ Rdkit-discuss mailing list Rdkit-discuss@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
