On 10/28/06, Douglas Kojetin <[EMAIL PROTECTED]> wrote:
Hi Edward-
I am able to feed commands into PyMOL from Tcl/Tk scripts through the
use of UNIX pipes. From within the Tcl/Tk script, a pipe is opened
to PyMOL, and the script sends commands to PyMOL. I can tell PyMOL
to open a PDB file, display it in a certain way (cartoon, ribbon),
highlight certain atoms or residues (by sticks, spheres, etc.), color
them, etc. I've never tried writing images, but I don't think it
would be too difficult. Is this the type of functionality you are
looking to incorporate into relax?
This is exactly what is needed. I didn't realise it accepted commands
from STDIN, I told you I didn't look very hard! That makes things
very easy to implement. Is there documentation for this interface?
Are they python commands you send?
Edward
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