Hi, Unfortunately, Sebastien is correct, this issue was caused by a bug in old code, from 2004, which was not yet fully tested. I'm sorry if this has caused any problems, this feature should have stayed in a development branch rather than being included in relax versions 0.3 to 1.2.10. This was fixed in relax 1.2.11 (https://gna.org/forum/forum.php?forum_id=1736), and announced in the relax-announce mailing list (https://mail.gna.org/public/relax-announce/2007-10/msg00000.html).
Regards, Edward On Fri, Jun 13, 2008 at 7:02 PM, Sébastien Morin <[EMAIL PROTECTED]> wrote: > Hi Barbara, > > There were two bugs in relax concerning jw_mapping. > > The bugs were respectively 9238 (https://gna.org/bugs/?9238) and 9259 > (https://gna.org/bugs/?9259) > > These were corrected in revisions 3298 (30-05-2007) and 3302 (20-06-2007). > > So, if your old version of relax was prior these dates, your old > calculated jw_mapping results were erroneous. > > Sorry for the inconvenience. > > Have a nice day ! > > > Sébastien Morin > > > > > Barbara wrote: >> URL: >> <http://gna.org/bugs/?11823> >> >> Summary: non-reproducible data with reduced spectral density >> mapping >> Project: relax >> Submitted by: bdanchec >> Submitted on: Friday 06/13/2008 at 15:32 >> Category: None >> Severity: 4 - Important >> Priority: 5 - Normal >> Status: None >> Privacy: Public >> Assigned to: None >> Originator Name: >> Originator Email: >> Open/Closed: Open >> Discussion Lock: Any >> Release: 1.2.13 >> Operating System: Microsoft Windows >> >> _______________________________________________________ >> >> Details: >> >> Hi- >> >> I am having a rather odd problem with Relax. I used Relax last year to >> calculate the spectral densities J(o), J(wN) and J(wH) for two proteins. This >> year I wanted to use Relax to calculate the same dataset for a slightly >> modified version of one of the proteins. I expected that the results would >> be the same for all residues except for the three residues in which the data >> changed (it's a 118 residue protein). Unfortunately I had to reinstall the >> hard drive on my computer recently, and thus also Relax and all the other >> programs. When I got everything up and running and calculated the spectral >> densities, they were way off from what I expected for all residues. For >> example, I originally got J(0) values between 0.01 - 0.07 ns/rad, but now I >> am getting J(0) values between 0.28 - 1.2 ns/rad. To see if it was something >> wrong in one of my input files, I recalculated the spectral densities I >> calculated last year, using the same exact input files and everything as I >> did last year, but those results now matched this new data (J(0) values >> between 0.28 - 1.2ns/rad). The two datasets I ran today are the same except >> for those three residues I changed, but the results are different from the >> original results I obtained last year. Any thoughts on what is different >> when I run these? I'm completely baffled.... any suggestions would be >> great! >> >> >> >> >> >> _______________________________________________________ >> >> Reply to this item at: >> >> <http://gna.org/bugs/?11823> >> >> _______________________________________________ >> Message sent via/by Gna! >> http://gna.org/ >> >> >> _______________________________________________ >> relax (http://nmr-relax.com) >> >> This is the relax-devel mailing list >> [email protected] >> >> To unsubscribe from this list, get a password >> reminder, or change your subscription options, >> visit the list information page at >> https://mail.gna.org/listinfo/relax-devel >> >> > > > _______________________________________________ > relax (http://nmr-relax.com) > > This is the relax-devel mailing list > [email protected] > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-devel > _______________________________________________ relax (http://nmr-relax.com) This is the relax-devel mailing list [email protected] To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-devel
